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SCNpilot_solid_1_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 414 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_13_1
unknown

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_13_2
unknown

Not on your lists

comp(248..850)
DNA (603bp) protein (201aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_13_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1024..2385
DNA (1362bp) protein (454aa)
integrase n=1 Tax=Acidovorax radicis RepID=UPI000237801B rbh
Phage-related integrase {ECO:0000313|EMBL:GAO21546.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp
phage integrase family protein
SCNpilot_solid_1_scaffold_13_4
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2369..2614)
DNA (246bp) protein (82aa)
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI000237801C
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_solid_1_scaffold_13_5
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2883..3257
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD45_9PROT
hypothetical protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
SCNpilot_solid_1_scaffold_13_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3250..3564
DNA (315bp) protein (105aa)
Transcriptional regulator, XRE family n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD46_9PROT
XRE family transcriptional regulator; K07726 putative transcriptional regulator Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
XRE family transcriptional regulator
SCNpilot_solid_1_scaffold_13_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4436..6157)
DNA (1722bp) protein (574aa)
Type IIS restriction enzyme Eco57I (EC:3.1.21.4)
Modification methylase PaeR7I n=2 Tax=Gammaproteobacteria RepID=S1HWV4_ECOLX rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_solid_1_scaffold_13_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6185..6418)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UUB1_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP79500.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
SCNpilot_solid_1_scaffold_13_9
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6415..7542)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035D4BB0 rbh
Putative Transcriptional regulator {ECO:0000313|EMBL:CCD29924.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" so
hypothetical protein rbh
SCNpilot_solid_1_scaffold_13_10
Candidatus Glomeribacter gigasporarum, Candidatus Glomeribacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7539..7931)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C6165
Uncharacterized protein {ECO:0000313|EMBL:CCD29923.1}; TaxID=1070319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Candidatus Glomeribacter.;" source="Candi
Hypothetical protein
SCNpilot_solid_1_scaffold_13_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8968..10296)
DNA (1329bp) protein (443aa)
Major facilitator superfamily MFS_1 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUM0_ALIDB rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU98096.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyc
SCNpilot_solid_1_scaffold_13_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10376..12202)
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EBE1AF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIJ47556.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
SCNpilot_solid_1_scaffold_13_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12338..13015
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XFZ1_DELAC
AraC family transcriptional regulator
Helix-turn-helix domain protein {ECO:0000313|EMBL:KFJ13883.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovoran
SCNpilot_solid_1_scaffold_13_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13172..14101
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAQ4_ACIET rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM31701.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_solid_1_scaffold_13_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14324..14656
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2I2_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM40457.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_solid_1_scaffold_13_16
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15028..15435
DNA (408bp) protein (136aa)
peptidase M48 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003656B64
Peptidase M48 {ECO:0000313|EMBL:KJA12159.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
peptidase m48 ste24p
SCNpilot_solid_1_scaffold_13_17
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15395..15862
DNA (468bp) protein (156aa)
Peptidase M48 Ste24p n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAQ6_ACIET
peptidase m48 ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ACM31703.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain
SCNpilot_solid_1_scaffold_13_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15895..16470
DNA (576bp) protein (192aa)
NADPH-dependent FMN reductase family protein; K00299 FMN reductase [EC:1.5.1.38] Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Putative flavoprotein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPW7_9BURK
Flavin reductase
SCNpilot_solid_1_scaffold_13_19
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16407..17222)
DNA (816bp) protein (272aa)
Transcriptional regulator, GntR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2I4_ACISJ rbh
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABM40459.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
SCNpilot_solid_1_scaffold_13_20
Diaphorobacter sp. PCA039, Diaphorobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17230..18918)
DNA (1689bp) protein (563aa)
Sigma54-specific transcriptional regulator n=1 Tax=Diaphorobacter sp. PCA039 RepID=C0KGK9_9BURK rbh
Sigma54-specific transcriptional regulator {ECO:0000313|EMBL:ACN62952.1}; TaxID=266831 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Diaphorobacter.;" source=
sigma-54 dependent trancsriptional regulator
SCNpilot_solid_1_scaffold_13_21
Diaphorobacter sp. J5-51, Diaphorobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19214..19459
DNA (246bp) protein (82aa)
Phenol hydroxylase subunit n=2 Tax=Diaphorobacter RepID=C0KGL0_9BURK
PyrK {ECO:0000313|EMBL:AFU93035.1}; TaxID=680496 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Diaphorobacter.;" source="Diaphorobacter sp. J5-51.;"
phenol hydroxylase subunit
SCNpilot_solid_1_scaffold_13_22
Diaphorobacter sp. PCA039, Diaphorobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19449..20441
DNA (993bp) protein (331aa)
Phenol hydroxylase subunit n=1 Tax=Diaphorobacter sp. PCA039 RepID=C0KGL1_9BURK rbh
Phenol hydroxylase subunit {ECO:0000313|EMBL:ACN62954.1}; TaxID=266831 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Diaphorobacter.;" source="Diaphorobacter
phenol hydroxylase subunit
SCNpilot_solid_1_scaffold_13_23
Diaphorobacter sp. J5-51, Diaphorobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20455..20739
DNA (285bp) protein (95aa)
PyrM n=1 Tax=Diaphorobacter sp. J5-51 RepID=K4K547_9BURK
PyrM {ECO:0000313|EMBL:AFU93036.1}; TaxID=680496 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Diaphorobacter.;" source="Diaphorobacter sp. J5-51.;"
phenol hydroxylase componen
SCNpilot_solid_1_scaffold_13_24
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20783..22342
DNA (1560bp) protein (520aa)
Phenol hydroxylase, P3 oxygenase component DmpN n=3 Tax=Bacteria RepID=U2G5C8_BURVI rbh
Phenol hydroxylase, P3 oxygenase component DmpN {ECO:0000313|EMBL:ERJ38255.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Bur
phenol 2-monooxygenase rbh
SCNpilot_solid_1_scaffold_13_25
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22339..22695
DNA (357bp) protein (119aa)
Phenol hydroxylase conserved region n=6 Tax=Burkholderiaceae RepID=A4JW17_BURVG
phenol hydroxylase region
Phenol hydroxylase {ECO:0000313|EMBL:AHB04295.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.
SCNpilot_solid_1_scaffold_13_26

Not on your lists

22743..23807
DNA (1065bp) protein (355aa)
Ferredoxin oxidoreductase n=1 Tax=uncultured bacterium RepID=C6KWI0_9BACT rbh
Ferredoxin oxidoreductase {ECO:0000313|EMBL:BAH90328.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase FAD/NAD(P)-binding subunit
SCNpilot_solid_1_scaffold_13_27

Not on your lists

23835..24227
DNA (393bp) protein (131aa)
Ferredoxin n=1 Tax=uncultured bacterium RepID=C6KUJ5_9BACT
Ferredoxin {ECO:0000313|EMBL:BAH89642.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ferredoxin
SCNpilot_solid_1_scaffold_13_28
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24229..25173
DNA (945bp) protein (315aa)
Metapyrocatechase {ECO:0000313|EMBL:EWS64334.1}; EC=1.13.11.2 {ECO:0000313|EMBL:EWS64334.1};; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydr
catechol 2,3 dioxygenase; K00446 catechol 2,3-dioxygenase [EC:1.13.11.2] id=5083397 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
catechol 2,3-dioxygenase (EC:1.13.11.2)
SCNpilot_solid_1_scaffold_13_29
Comamonas sp. JS765, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25261..25722
DNA (462bp) protein (154aa)
Hypothetical CmpX-like protein n=1 Tax=Comamonas sp. JS765 RepID=Q9F9J1_9BURK
Hypothetical CmpX-like protein {ECO:0000313|EMBL:AAG17129.1}; TaxID=58226 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. JS7
GlcG
SCNpilot_solid_1_scaffold_13_30
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25739..27199
DNA (1461bp) protein (487aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
2-hydroxymuconic semialdehyde dehydrogenase n=1 Tax=uncultured bacterium RepID=C6KUK1_9BACT rbh
2-hydroxymuconic semialdehyde dehydrogenase {ECO:0000313|EMBL:KGG85663.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamo
Displaying items 1-30 of 414 in total

View Taxonomy