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SCNpilot_solid_1_scaffold_13

Search features with annotation key words

Displaying items 391-414 of 414 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_13_389
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

396478..398379
DNA (1902bp) protein (634aa)
Protein translocase subunit SecD n=2 Tax=Alicycliphilus denitrificans RepID=E8TX30_ALIDB rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
protein-export membrane protein secd
SCNpilot_solid_1_scaffold_13_390
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

398400..399353
DNA (954bp) protein (318aa)
Protein-export membrane protein SecF n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TW40_ACIAC rbh
secF; preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
SCNpilot_solid_1_scaffold_13_391
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

399505..401739
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHS1_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34780.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
SCNpilot_solid_1_scaffold_13_trna_2
unknown

Not on your lists

401775..401848
DNA (74bp)
transferRNA
SCNpilot_solid_1_scaffold_13_392
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

401910..402338
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TIZ7_ACIAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM30935.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (s
SCNpilot_solid_1_scaffold_13_393
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

402362..402703
DNA (342bp) protein (114aa)
Ferredoxin-like protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TVG9_ALIDB
ferredoxin-like protein
Ferredoxin-like protein {ECO:0000313|EMBL:ADU98179.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_13_394
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

402894..403391
DNA (498bp) protein (166aa)
alpha/beta hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003602C6F
Predicted hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:GAD21126.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sou
hypothetical protein
SCNpilot_solid_1_scaffold_13_395
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

403467..404630
DNA (1164bp) protein (388aa)
beta-lactamase (EC:3.5.2.6)
Beta-lactamase {ECO:0000313|EMBL:ADU98181.1}; EC=3.5.2.6 {ECO:0000313|EMBL:ADU98181.1};; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
Beta-lactamase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVH1_ALIDB rbh
SCNpilot_solid_1_scaffold_13_396
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

404752..406251
DNA (1500bp) protein (500aa)
transcriptional regulator (EC:2.6.1.1)
Transcriptional regulator, GntR family n=2 Tax=Nitrosococcus oceani RepID=Q3JCP3_NITOC
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABA57403.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitroso
SCNpilot_solid_1_scaffold_13_397
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(406268..406984)
DNA (717bp) protein (239aa)
Heme exporter protein B n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKW5_AZOSU
heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain
SCNpilot_solid_1_scaffold_13_398
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(406981..407460)
DNA (480bp) protein (160aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IWD7_9GAMM
cytochrome C biogenesis protein CcmA
SCNpilot_solid_1_scaffold_13_399
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(407642..408886)
DNA (1245bp) protein (415aa)
Cytochrome c-type biogenesis protein CcmI n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIS5_9BURK
cycH; hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
cytochrome c-type biogenesis protein CcmI
SCNpilot_solid_1_scaffold_13_400
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(408883..409359)
DNA (477bp) protein (159aa)
Cytochrome c-type biogenesis protein CcmH n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRB7_RUBGI
C-type cytochrome biogenesis protein
C-type cytochrome biogenesis protein {ECO:0000313|EMBL:ABM94171.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphil
SCNpilot_solid_1_scaffold_13_401
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(409352..409879)
DNA (528bp) protein (176aa)
Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK54_9BURK
Periplasmic protein thiol:disulfide oxidoreductase, DsbE subfamily {ECO:0000313|EMBL:EHR71369.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
periplasmic protein thiol--disulfide oxidoreductase DsbE
SCNpilot_solid_1_scaffold_13_402
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(409876..411891)
DNA (2016bp) protein (672aa)
Cytochrome c-type biogenesis protein CcmF n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9Q9_NITMU
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AKH38251.1}; TaxID=44574 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomo
cytochrome c-type biogenesis protein CcmF
SCNpilot_solid_1_scaffold_13_403
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411888..412343)
DNA (456bp) protein (152aa)
Cytochrome c-type biogenesis protein CcmE n=5 Tax=Proteobacteria RepID=CCME_PSEAI
CcmE/CycJ protein; K02197 cytochrome c-type biogenesis protein CcmE Tax=RBG_16_Betaproteobacteria_66_20_curated
ccmE; periplasmic heme chaperone
SCNpilot_solid_1_scaffold_13_404
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412347..412484)
DNA (138bp) protein (46aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000301FF57
heme exporter protein CcmD; K02196 heme exporter protein D Tax=CG_Rhodof_03
heme exporter protein CcmD
SCNpilot_solid_1_scaffold_13_405
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412484..413296)
DNA (813bp) protein (271aa)
Heme exporter protein CcmC n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AJX2_NITEC
heme exporter protein CcmC; K02195 heme exporter protein C Tax=CG_Rhodocyc_01
heme exporter protein CcmC
SCNpilot_solid_1_scaffold_13_406
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(413302..414330)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ45_NITHN
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
SCNpilot_solid_1_scaffold_13_407
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(414415..416169)
DNA (1755bp) protein (585aa)
hydroxylamine oxidoreductase (EC:1.7.3.4)
Hydroxylamine oxidoreductase {ECO:0000313|EMBL:AAV97335.1}; EC=1.7.2.6 {ECO:0000313|EMBL:AAV97335.1};; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacter
Hydroxylamine oxidoreductase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LL28_RUEPO
SCNpilot_solid_1_scaffold_13_408
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


416407..416784
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=2 Tax=Delftia RepID=RS12_DELAS
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delfti
SCNpilot_solid_1_scaffold_13_409
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


416948..417421
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F7CDC rbh
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
30S ribosomal protein S7
SCNpilot_solid_1_scaffold_13_410
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

417508..419616
DNA (2109bp) protein (703aa)
Elongation factor G n=2 Tax=Alicycliphilus denitrificans RepID=E8TVH4_ALIDB rbh
translation elongation factor g
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
SCNpilot_solid_1_scaffold_13_411
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

419784..419882
DNA (99bp) protein (33aa)
Elongation factor Tu n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5APK0_BURRH
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria
Displaying items 391-414 of 414 in total

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