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SCNpilot_solid_1_scaffold_13

Search features with annotation key words

Displaying items 271-300 of 414 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_13_269
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277869..278651)
DNA (783bp) protein (261aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
ABC transporter related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TYQ9_ALIDB rbh
ABC transporter related protein {ECO:0000313|EMBL:ADV02068.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
SCNpilot_solid_1_scaffold_13_270
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(278648..279658)
DNA (1011bp) protein (337aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8TYQ8_ALIDB rbh
inner-membrane translocator
ABC transporter permease {ECO:0000313|EMBL:GAO25665.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus s
SCNpilot_solid_1_scaffold_13_271
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(279664..280524)
DNA (861bp) protein (287aa)
Inner-membrane translocator n=2 Tax=Alicycliphilus denitrificans RepID=E8TYQ7_ALIDB rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADV02066.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus
SCNpilot_solid_1_scaffold_13_272
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280558..281763)
DNA (1206bp) protein (402aa)
Extracellular ligand-binding receptor n=2 Tax=Alicycliphilus denitrificans RepID=E8TYQ6_ALIDB rbh
ABC transporter substrate-binding protein
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADV02065.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphi
SCNpilot_solid_1_scaffold_13_273
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281964..282821
DNA (858bp) protein (286aa)
GntR domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TYQ5_ALIDB rbh
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ADV02064.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
SCNpilot_solid_1_scaffold_13_274
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(283133..284677)
DNA (1545bp) protein (515aa)
transcriptional regulator domain-containing protein id=5079165 bin=GWF1_Burkholderiales_GWF1_66_17 species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
transcriptional regulator domain-containing protein Tax=GWE1_Burkholderiales_65_30_curated
transcriptional regulator domain-containing protein
SCNpilot_solid_1_scaffold_13_275
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284871..285170
DNA (300bp) protein (100aa)
id=5079166 Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
id=5079166 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
SCNpilot_solid_1_scaffold_13_276
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285253..285642
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0003168FA5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
cupin 2 domain-containing protein
SCNpilot_solid_1_scaffold_13_277
unknown

Not on your lists

285700..285801
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_13_278
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(285944..287305)
DNA (1362bp) protein (454aa)
beta-alanine--pyruvate transaminase (EC:2.6.1.18)
beta alanine--pyruvate aminotransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E3F12 rbh
Beta-alanine-pyruvate transaminase {ECO:0000313|EMBL:GAD22351.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
SCNpilot_solid_1_scaffold_13_279
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

287458..287679
DNA (222bp) protein (74aa)
Putative addiction module component CHP02574 family protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IUU6_9GAMM
Putative addiction module component CHP02574 family protein {ECO:0000313|EMBL:EGW21631.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methy
SCNpilot_solid_1_scaffold_13_280
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

287681..287983
DNA (303bp) protein (101aa)
hypothetical protein id=12494109 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF90141.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_solid_1_scaffold_13_281
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288053..288937
DNA (885bp) protein (295aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WD80_ACISJ rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABM44205.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
SCNpilot_solid_1_scaffold_13_282
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(288934..289617)
DNA (684bp) protein (228aa)
PKHD-type hydroxylase Ajs_0512 {ECO:0000255|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000255|HAMAP-Rule:MF_00657};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
PKHD-type hydroxylase Ajs_0512 n=2 Tax=Acidovorax sp. (strain JS42) RepID=Y512_ACISJ rbh
putative hydroxylase
SCNpilot_solid_1_scaffold_13_283
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(289611..290705)
DNA (1095bp) protein (365aa)
(S)-2-hydroxy-acid oxidase (EC:1.1.3.15)
(S)-2-hydroxy-acid oxidase {ECO:0000313|EMBL:AEB82996.1}; EC=1.1.3.15 {ECO:0000313|EMBL:AEB82996.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
FMN-dependent alpha-hydroxy acid dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXB5_ALIDB rbh
SCNpilot_solid_1_scaffold_13_284
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290758..292383)
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030C6009
Uncharacterized protein {ECO:0000313|EMBL:KGF70723.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_solid_1_scaffold_13_285
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292491..294803)
DNA (2313bp) protein (771aa)
TonB-dependent receptor n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3D9_ACISJ rbh
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABM40764.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
SCNpilot_solid_1_scaffold_13_286
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294977..295870)
DNA (894bp) protein (298aa)
Beta-lactamase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3E0_ACISJ rbh
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABM40765.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (
SCNpilot_solid_1_scaffold_13_287
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296105..297754
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FAFDE5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD36186.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_solid_1_scaffold_13_288
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

297751..298902
DNA (1152bp) protein (384aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BQ37_DELAS rbh
Aminotransferase DegT {ECO:0000313|EMBL:EXU80359.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA187
DegT/DnrJ/EryC1/StrS aminotransferase
SCNpilot_solid_1_scaffold_13_289
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298912..299544)
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=A6V999_PSEA7
Uncharacterized protein {ECO:0000313|EMBL:ETU92293.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
hypothetical protein
SCNpilot_solid_1_scaffold_13_290
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(299541..300713)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=V4R063_PSEAI rbh
Rieske family iron-sulfur cluster-binding protein rbh
Rieske family iron-sulfur cluster-binding protein {ECO:0000313|EMBL:KFF33910.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
SCNpilot_solid_1_scaffold_13_291
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(300710..301894)
DNA (1185bp) protein (395aa)
Methyltransferase, FkbM family protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V9A1_PSEA7 rbh
methyltransferase, FkbM family protein rbh
Methyltransferase, FkbM family protein {ECO:0000313|EMBL:ABR85855.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
SCNpilot_solid_1_scaffold_13_292
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(301887..302522)
DNA (636bp) protein (212aa)
Acetyltransferase n=2 Tax=Pseudomonas aeruginosa RepID=A6V9A2_PSEA7
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:KFF33912.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
SCNpilot_solid_1_scaffold_13_293
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302530..303276)
DNA (747bp) protein (249aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Pseudomonas aeruginosa RepID=A6V9A3_PSEA7 rbh
short chain dehydrogenase/reductase family oxidoreductase
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:ABR81796.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudo
SCNpilot_solid_1_scaffold_13_294
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303305..303709)
DNA (405bp) protein (135aa)
Ribonuclease VapC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTK0_POLNA
PilT domain-containing protein; K07062 Tax=CG_Rhodof_02
PilT domain-containing protein
SCNpilot_solid_1_scaffold_13_295
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303723..303962)
DNA (240bp) protein (80aa)
SpoVT/AbrB protein n=1 Tax=uncultured bacterium RepID=K2CY01_9BACT
SpoVT/AbrB domain-containing protein Tax=CG_Rhodof_02
SpoVT/AbrB domain-containing protein
SCNpilot_solid_1_scaffold_13_296
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(304039..305076)
DNA (1038bp) protein (346aa)
beta-ketoacyl-acyl-carrier-protein synthase I (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WAF7_DELAC rbh
3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000313|EMBL:EPD36176.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Del
SCNpilot_solid_1_scaffold_13_297
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(305082..305309)
DNA (228bp) protein (76aa)
acyl carrier protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F6DF24
acyl carrier protein-like protein
Acyl carrier protein-related protein {ECO:0000313|EMBL:ABX33261.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acid
SCNpilot_solid_1_scaffold_13_298
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(305409..306638)
DNA (1230bp) protein (410aa)
fliC; flagellin-related hook-associated protein; K02406 flagellin id=12553378 bin=BDI species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
fliC; flagellin-related hook-associated protein; K02406 flagellin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
flagellin
Displaying items 271-300 of 414 in total

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