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SCNpilot_solid_1_scaffold_13

Search features with annotation key words

Displaying items 61-90 of 414 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_13_61
Pseudomonas straminea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58710..59411
DNA (702bp) protein (234aa)
ProX protein n=1 Tax=Pseudomonas straminea RepID=Q9AQI3_PSEOC
ProX protein {ECO:0000313|EMBL:BAB21454.2}; TaxID=47882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas straminea.;"
molybdenum ABC transporter substrate-binding protein
SCNpilot_solid_1_scaffold_13_62
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59441..60469
DNA (1029bp) protein (343aa)
4-oxalomesaconate hydratase n=2 Tax=Comamonas testosteroni RepID=D8D901_COMTE
4-oxalomesaconate hydratase {ECO:0000313|EMBL:EHN65772.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testoste
4-oxalomesaconate hydratase
SCNpilot_solid_1_scaffold_13_63
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60555..61238
DNA (684bp) protein (228aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase n=4 Tax=Bacteria RepID=A9C0K5_DELAS
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:EPD34406.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delfti
SCNpilot_solid_1_scaffold_13_64
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61283..62182
DNA (900bp) protein (300aa)
dehydrogenase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002FACC9A rbh
Phosphogluconate dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:GAO20809.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.
phosphogluconate dehydrogenase, NAD-binding protein
SCNpilot_solid_1_scaffold_13_65
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62179..63105
DNA (927bp) protein (309aa)
2-pyrone-4,6-dicarbaxylate hydrolase n=1 Tax=Comamonas testosteroni RepID=PDCH_COMTE rbh
2-pyrone-4,6-dicarboxylate hydrolase {ECO:0000313|EMBL:KGH07554.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas tes
2-pyrone-4,6-dicarboxylic acid hydrolase
SCNpilot_solid_1_scaffold_13_66
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63185..63622
DNA (438bp) protein (146aa)
protocatechuate 4,5-dioxygenase subunit alpha; K04100 protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8] Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
Protocatechuate 4,5-dioxygenase subunit alpha n=1 Tax=Thauera sp. 63 RepID=N6X6V5_9RHOO
protocatechuate 4,5-dioxygenase subunit alpha
SCNpilot_solid_1_scaffold_13_67
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63624..64496
DNA (873bp) protein (291aa)
protocatechuate 4,5-dioxygenase subunit beta (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase {ECO:0000313|EMBL:ABX37075.1}; EC=1.13.11.8 {ECO:0000313|EMBL:ABX37075.1};; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
Protocatechuate 4,5-dioxygenase n=2 Tax=Delftia acidovorans RepID=A9C0K2_DELAS rbh
SCNpilot_solid_1_scaffold_13_68
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64539..65495
DNA (957bp) protein (319aa)
Probable oxidoreductase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K8J8_AZOSB rbh
ligC; oxidoreductase
Probable oxidoreductase {ECO:0000313|EMBL:CAL95153.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).
SCNpilot_solid_1_scaffold_13_69
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65525..66703
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000379FEC3
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDM24509.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source=
SCNpilot_solid_1_scaffold_13_70
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66844..67698
DNA (855bp) protein (285aa)
Inner-membrane translocator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SGA3_9BURK
High-affinity branched-chain amino acid transport system permease protein LivH
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM24177.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_13_71
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67708..68757
DNA (1050bp) protein (350aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EL06_9BURK
Branched-chain amino acid transport system permease protein LivM
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM24178.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
SCNpilot_solid_1_scaffold_13_72
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68754..69503
DNA (750bp) protein (250aa)
ABC-type branched-chain amino acid transport system, ATPase component protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8ISQ2_HERSS
putative ATP-binding ABC transporter protein
Putative ATP-binding ABC transporter protein {ECO:0000313|EMBL:CDM24179.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
SCNpilot_solid_1_scaffold_13_73
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69496..70236
DNA (741bp) protein (247aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46U18_CUPPJ
Branched-chain amino acid transport ATP-binding protein LivF
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM24180.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_13_74
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70229..71260
DNA (1032bp) protein (344aa)
aldo/keto reductase n=1 Tax=Chryseobacterium taeanense RepID=UPI0002E6B5F9 rbh
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:KEH07066.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
SCNpilot_solid_1_scaffold_13_75
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71269..72081)
DNA (813bp) protein (271aa)
exodeoxyribonuclease III (EC:4.2.99.18)
Exodeoxyribonuclease III Xth n=2 Tax=Alicycliphilus denitrificans RepID=E8TUS1_ALIDB rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:KJA12161.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;
SCNpilot_solid_1_scaffold_13_76
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72086..72778
DNA (693bp) protein (231aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MB28_ACIET rbh
SCNpilot_solid_1_scaffold_13_77
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72799..73476
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DFF85
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAD24458.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
SCNpilot_solid_1_scaffold_13_78
Pelistega sp. HM-7, Pelistega, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73513..74838)
DNA (1326bp) protein (442aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Comamonas testosteroni S44 RepID=D8DCR5_COMTE
glutamyl-tRNA(Gln) amidotransferase subunit B
SCNpilot_solid_1_scaffold_13_79
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74841..76328)
DNA (1488bp) protein (496aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit a; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWA2_Curvibacter_64_110_curated
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TUS5_ALIDB rbh
glutamyl-tRNA(gln) amidotransferase, a subunit
SCNpilot_solid_1_scaffold_13_80
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76333..76632)
DNA (300bp) protein (100aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
glutamyl-tRNA amidotransferase subunit C n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A7F1
glutamyl-tRNA(Gln) amidotransferase subunit C
SCNpilot_solid_1_scaffold_13_81
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76836..77879
DNA (1044bp) protein (348aa)
rod shape-determining protein MreB n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003824720 rbh
Rod shape-determining protein mreb {ECO:0000313|EMBL:GAD24454.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax
rod shape-determining protein mreb
SCNpilot_solid_1_scaffold_13_82
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77917..78855
DNA (939bp) protein (313aa)
Cell shape-determining protein MreC n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MB34_ACIET rbh
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
rod shape-determining protein mrec
SCNpilot_solid_1_scaffold_13_83
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78852..79370
DNA (519bp) protein (173aa)
rod shape-determining protein MreD n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000375A515
Cell shape-determining protein {ECO:0000313|EMBL:GAD24451.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
rod shape-determining protein mred
SCNpilot_solid_1_scaffold_13_84
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79370..81313
DNA (1944bp) protein (648aa)
penicillin-binding protein 2 (EC:2.4.1.129)
penicillin-binding protein 2 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DDD5F rbh
Penicillin-binding protein 2 {ECO:0000313|EMBL:GAD24450.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
SCNpilot_solid_1_scaffold_13_85
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81339..82097)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MB42_ACIET rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM31726.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
SCNpilot_solid_1_scaffold_13_86
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82322..83989)
DNA (1668bp) protein (556aa)
glucose-methanol-choline oxidoreductase id=12552206 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
glucose-methanol-choline oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glucose-methanol-choline oxidoreductase
SCNpilot_solid_1_scaffold_13_87
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84129..85283
DNA (1155bp) protein (385aa)
UPI0003A1847D related cluster n=1 Tax=unknown RepID=UPI0003A1847D
ABC-type transport system involved in resistance to organic solvents, permease component {ECO:0000313|EMBL:GAD24434.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
hypothetical protein
SCNpilot_solid_1_scaffold_13_88
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85280..86089
DNA (810bp) protein (270aa)
iron ABC transporter ATP-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003652F1C
ABC-type transport system involved in resistance to organic solvents, ATPase component {ECO:0000313|EMBL:GAD24433.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
ABC transporter
SCNpilot_solid_1_scaffold_13_89
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86089..87066
DNA (978bp) protein (326aa)
Mammalian cell entry related domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2N1_ACISJ rbh
hypothetical protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ABM40506.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acido
SCNpilot_solid_1_scaffold_13_90
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87078..87746
DNA (669bp) protein (223aa)
Putative lipoprotein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2N2_ACISJ
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ABM40507.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
Displaying items 61-90 of 414 in total

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