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SCNpilot_solid_1_scaffold_13

Search features with annotation key words

Displaying items 31-60 of 414 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_13_31
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27262..28128
DNA (867bp) protein (289aa)
2,6-dioxo-6-phenylhexa-3-enoate hydrolase (EC:3.7.1.8)
Alpha/beta hydrolase fold protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN7_ALIDB rbh
2-hydroxymuconic semialdehyde hydrolase {ECO:0000313|EMBL:GAO21633.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
SCNpilot_solid_1_scaffold_13_32
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28165..28947
DNA (783bp) protein (261aa)
2-oxopent-4-enoate hydratase (EC:4.2.1.80)
2-oxopent-4-enoate hydratase n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN8_ALIDB rbh
Hydratase/decarboxylase {ECO:0000313|EMBL:ACY33895.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
SCNpilot_solid_1_scaffold_13_33
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28975..29889
DNA (915bp) protein (305aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01657, ECO:0000256|SAAS:SAAS00042164}; EC=1.2.1.10 {ECO:0000256|HAMAP-Rule:MF_01657};; Acetaldehyde dehydrogenase [acetylating] {ECO:0000256|HAMAP
Acetaldehyde dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN9_ALIDB rbh
SCNpilot_solid_1_scaffold_13_34
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30034..31068
DNA (1035bp) protein (345aa)
4-hydroxy-2-oxovalerate aldolase {ECO:0000256|HAMAP-Rule:MF_01656, ECO:0000256|SAAS:SAAS00035546}; Short=HOA {ECO:0000256|HAMAP-Rule:MF_01656};; EC=4.1.3.39 {ECO:0000256|HAMAP-Rule:MF_01656, ECO:00002
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZUI4_9RHOO rbh
4-hydroxy-2-ketovalerate aldolase
SCNpilot_solid_1_scaffold_13_35
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31084..31872
DNA (789bp) protein (263aa)
Hydratase/decarboxylase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J1Y9_COMT2 rbh
Hydratase/decarboxylase
Hydratase/decarboxylase {ECO:0000313|EMBL:ACY33892.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
SCNpilot_solid_1_scaffold_13_36
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31938..33197
DNA (1260bp) protein (420aa)
Putative substrate-binding component of ABC transporter n=1 Tax=uncultured bacterium RepID=U6C335_9BACT
ABC transporter substrate-binding protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
putative ABC transporter substrate-binding protein
SCNpilot_solid_1_scaffold_13_37
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33207..33974
DNA (768bp) protein (256aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003680E3E rbh
putative branched-chain amino acid ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Branched-chain amino acid transport ATP-binding protein LivG
SCNpilot_solid_1_scaffold_13_38
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34243..34959
DNA (717bp) protein (239aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MK95_PSEPS rbh
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curate
Branched-chain amino acid transport ATP-binding protein LivF
SCNpilot_solid_1_scaffold_13_39
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34959..35834
DNA (876bp) protein (292aa)
Putative branched-chain amino acid ABC transporter permease protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6ASA3_PSERE
putative branched-chain amino acid ABC transporter permease protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
putative branched-chain amino acid ABC transporter permease protein
SCNpilot_solid_1_scaffold_13_40
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35838..36818
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037132A4
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
Branched-chain amino acid transport system permease protein LivM
SCNpilot_solid_1_scaffold_13_41
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36825..38477)
DNA (1653bp) protein (551aa)
Permease family protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HII5_ACHXA rbh
permease
Permease family protein 1 {ECO:0000313|EMBL:ADP14270.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xyl
SCNpilot_solid_1_scaffold_13_42
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38800..40377
DNA (1578bp) protein (526aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; Flags: Fragment;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
l-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase (Fragment) n=1 Tax=Acidovorax sp. CF316 RepID=J1EHE2_9BURK
SCNpilot_solid_1_scaffold_13_43
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40488..41624)
DNA (1137bp) protein (379aa)
nadA; quinolinate synthase A (EC:2.5.1.72)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
Quinolinate synthase A n=1 Tax=Variovorax paradoxus B4 RepID=T1XFI2_VARPD rbh
SCNpilot_solid_1_scaffold_13_44
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41636..42517)
DNA (882bp) protein (294aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:ACS20711.1}; EC=2.4.2.19 {ECO:0000313|EMBL:ACS20711.1};; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWV4_VARPS rbh
SCNpilot_solid_1_scaffold_13_45
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42677..43243)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DTN1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIV73676.1}; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. F
hypothetical protein
SCNpilot_solid_1_scaffold_13_46
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43245..43883)
DNA (639bp) protein (213aa)
Beta-lactamase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUP4_ALIDB rbh
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:ADU98120.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
SCNpilot_solid_1_scaffold_13_47
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

44108..45505
DNA (1398bp) protein (466aa)
Putative lipoprotein n=1 Tax=Formosa sp. AK20 RepID=M7MK76_9FLAO
Putative lipoprotein {ECO:0000313|EMBL:EMQ95491.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK20.;"
lipoprotein
SCNpilot_solid_1_scaffold_13_48
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45581..47290)
DNA (1710bp) protein (570aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1) rbh
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:EWS61302.1}; EC=6.2.1.1 {ECO:0000313|EMBL:EWS61302.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium
Putative acetyl-coenzyme A synthetase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCL6_METPP rbh
SCNpilot_solid_1_scaffold_13_49
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47427..48614)
DNA (1188bp) protein (396aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:AIJ46758.1}; EC=1.14.13.2 {ECO:0000313|EMBL:AIJ46758.1};; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVQ9_COMTE
SCNpilot_solid_1_scaffold_13_50
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48748..49536
DNA (789bp) protein (263aa)
Transcriptional regulator, IclR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WVR0_COMTE rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EED67682.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
SCNpilot_solid_1_scaffold_13_51
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49735..50907
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031DDB10 rbh
Extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CDN51077.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhiz
SCNpilot_solid_1_scaffold_13_52
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50944..51804
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000316B8F2 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ12877.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
putative branched-chain amino acid ABC transporter, permease component
SCNpilot_solid_1_scaffold_13_53
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51807..52784
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D6F7F9 rbh
Branched-chain amino acid ABC transporter, permease protein
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:CDN51075.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agroba
SCNpilot_solid_1_scaffold_13_54
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52781..53524
DNA (744bp) protein (248aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QGX2_RHOPT
branched-chain amino acid ABC transporter ATP-binding protein
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAE26431.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
SCNpilot_solid_1_scaffold_13_55
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53527..54240
DNA (714bp) protein (238aa)
Putative Branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZFP4_AZOL4
putative Branched-chain amino acid ABC transporter, ATP-binding protein
Putative Branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBS90429.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospiri
SCNpilot_solid_1_scaffold_13_56
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54258..55469
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002FCDA2D rbh
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:ADU45219.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustr
SCNpilot_solid_1_scaffold_13_57
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55494..55817
DNA (324bp) protein (108aa)
ferredoxin n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C49E9
Ferredoxin {ECO:0000313|EMBL:EHR71536.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
fdxP; ferrodoxin
SCNpilot_solid_1_scaffold_13_58
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55825..57054
DNA (1230bp) protein (410aa)
NAD(FAD)-dependent dehydrogenase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL17_9BURK rbh
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:EHR73760.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_solid_1_scaffold_13_59
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57127..57621
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000360B311
MarR family transcriptional regulator {ECO:0000313|EMBL:ACU65290.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
MarR family transcriptional regulator
SCNpilot_solid_1_scaffold_13_60
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57665..58573)
DNA (909bp) protein (303aa)
Transcriptional regulator, LysR family n=3 Tax=Comamonas testosteroni RepID=D0J820_COMT2 rbh
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACY32900.1}; TaxID=688245 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
Displaying items 31-60 of 414 in total

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