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SCNpilot_solid_1_scaffold_105_65

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 64007..64522

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3P1_ACIDE similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 179.0
  • Bit_score: 215
  • Evalue 5.60e-53
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EER60904.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 179.0
  • Bit_score: 213
  • Evalue 2.30e-52
sigma-24 (FecI-like protein) similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 182.0
  • Bit_score: 211
  • Evalue 1.80e-52

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Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGAAGCACGAACAGGTTGTCCAGCAACTGCCCGCGCTGCGCCGCTATGCGCGTGCGCTGACGGGCGACCGCTGGGCGGCCGACGACCTGCTGCAGGACACGCTGGAACGCGCCTGCGGCAAATGGCGGCTGTGGATCGCCGGCACCGATCTGCGTGCCTGGCTGTTCACCTTGATGCACAACCTTTATCTGAATGAATGCCGTACAGCGCAGGCGCGGTCTGCGGCGGTAGCTATTGATGATGTAGCAAACGAGCTCGTGGCGCCCGGCCGGCCGCTGGACGAAGCGATGGATCTCGACCGCTGCCTGCAGCGCCTGCCCGCCGAGCAGCGCGCGGTGCTGCTGCTGGTGACGCTGGAAGACCTGGATTACCAGGAGGTGGCGCGGGTGCTGAAGATTCCCGTGGGCACGGTGATGTCGCGCCTCGCGCGCGCGCGCGCCCGTTTGCGCGAGCTGATGCAGGCAGGCGCCGGTGCGCCGGCGCTTGCCGAACCGGCGCTGCGGCGCCTGAAATAA
PROTEIN sequence
Length: 172
VKHEQVVQQLPALRRYARALTGDRWAADDLLQDTLERACGKWRLWIAGTDLRAWLFTLMHNLYLNECRTAQARSAAVAIDDVANELVAPGRPLDEAMDLDRCLQRLPAEQRAVLLLVTLEDLDYQEVARVLKIPVGTVMSRLARARARLRELMQAGAGAPALAEPALRRLK*