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SCNpilot_solid_1_scaffold_105_77

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(74111..74740)

Top 3 Functional Annotations

Value Algorithm Source
Tfp pilus assembly protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375057 similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 190.0
  • Bit_score: 192
  • Evalue 4.80e-46
general secretion pathway, GspH; K08084 type IV fimbrial biogenesis protein FimT Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 185.0
  • Bit_score: 178
  • Evalue 7.70e-42
general secretion pathway, GspH similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 220.0
  • Bit_score: 176
  • Evalue 5.90e-42

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Taxonomy

R_Curvibacter_63_18 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGTACAGGTACCGCAAGTGCCACAAACCCAAAACTCTGCTGGCCGTGATCTTTGAGGATTCAAATACTCGTGAACTCGGTTTTACGTTGATCGAGTTGATGGTCACAGTTTCCATCGCGGCAATTCTCATGATGGTTGCAGCACCCAGCTTCGTTAGCTATCAGAGAAATTCCGAGTTGAGTTCAATTACAAACACATTCCTTTCTGCCATCAATGCGGCTCGCGGCGAAGCCATGAAACGCAACATGTATGCAGGAATTTCGCCTAGAGATGGTTCCAACTGGAGTAGTGGATGGATTGTGTACATCGATAAAAATATGGATCACAATTTCAGCGCGAGTGATGATGATGTCATATTTGAGCAATCTTCCCCACCAAGCTATATCTCCATCACAGGGACAGGTACGGCGAGCGAGTCTCCTCCATACGTTTCTTACAATGGATCTGGATATCCAAGGAAGACGAGTGGTGGATTTGATGCGCTTACCATCAGCCTCACACGTAATGATGTTTCAGCCGCGGAGGCAGCAGAGCAGACACGTCGGCTCATCGTAGCGGCTTCTGGGAGGACTCGCAGTTGCAAGCCATCACTGGATCCCGCGACATGCAAAGCTAGCGCGACGGAGTAA
PROTEIN sequence
Length: 210
MYRYRKCHKPKTLLAVIFEDSNTRELGFTLIELMVTVSIAAILMMVAAPSFVSYQRNSELSSITNTFLSAINAARGEAMKRNMYAGISPRDGSNWSSGWIVYIDKNMDHNFSASDDDVIFEQSSPPSYISITGTGTASESPPYVSYNGSGYPRKTSGGFDALTISLTRNDVSAAEAAEQTRRLIVAASGRTRSCKPSLDPATCKASATE*