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SCNpilot_solid_1_scaffold_54_250

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 267056..267787

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Acidovorax sp. CF316 RepID=J0UDA5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 218.0
  • Bit_score: 228
  • Evalue 5.40e-57
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 214.0
  • Bit_score: 232
  • Evalue 5.20e-58
OstA family protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 221.0
  • Bit_score: 227
  • Evalue 4.40e-57

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGGCTGACCGGGTGGCGCGCTTCCCATGCAGGCGCGGGGCGGTGGCTACAATCGATTGCAAGAACCGTGCCTTGTACCGCGCCATGACTCATCGCCACCCCCTGCTGCTGCTCGCCAGTGTGCTGGTGCTTGCCACCGGCAGCGCGGCGCATGCGGAAAAGACCGACCGCGACCAGCCGATGCACATCGAGGCCGACAGCCTGGTGCGCGACGATGCCAAGCTCACCAGCGTCTTCACCGGCAACGTGGTCATCACCAAGGGCAGCATCGTGCTGCGCGGCGCCAGGGTGCAGGTGCAGGAGGACGGACAGGGCCACCAGAGCGGCATCGTCACCGCGGCGCCCGGCCAGCGCGCCTACTTCCGCCAGAAGCGCGACACCCCCAAGGGCGCGCCCGAGGAGTTCATCGAGGGCGAGGCCGAAACCATTGACTGGGACGGACGCACCGAGCTCGTCAAGCTCAAGCAGCGCGCCGAGCTGCGCCGCCTGCGCGCCGGCGTGCTGAGCGACGACATCAGCGGCGCGCTCATCACCTACAACAACGCCACCGACATCTTCACCGTCGATGGCGCGCCACGCAAGCCAGGGCAGACGGGCGCCGGCGGCGACCAGCGCGTGCGCGCCACGCTGGCACCCAAGGAAAAGCCCGCGCAGCCCGGCGCCCCGACCGCTGAAACACCCGCTTTGCGCGCGAGCCCGGAGCTGGCGCCCGCGCCGCGCCAGGCGCCATGA
PROTEIN sequence
Length: 244
MADRVARFPCRRGAVATIDCKNRALYRAMTHRHPLLLLASVLVLATGSAAHAEKTDRDQPMHIEADSLVRDDAKLTSVFTGNVVITKGSIVLRGARVQVQEDGQGHQSGIVTAAPGQRAYFRQKRDTPKGAPEEFIEGEAETIDWDGRTELVKLKQRAELRRLRAGVLSDDISGALITYNNATDIFTVDGAPRKPGQTGAGGDQRVRATLAPKEKPAQPGAPTAETPALRASPELAPAPRQAP*