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SCNpilot_solid_1_scaffold_111_20

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 19940..23530

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=296591 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 999.99
  • Bit_score: 1805
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Curvibacter lanceolatus RepID=UPI0003733133 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 999.99
  • Bit_score: 1823
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 999.99
  • Bit_score: 1805
  • Evalue 0.0

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Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3591
ATGCAACTCCCTACCCTCACCGCCGGCAAGCGCTTCACCCTGCACCGCTGCGCCGGTTCCAGCGACGCCTTGCTGCTCTCGCGCCTGGCGCAGAGCGTGCGCGCCGACCGGCGCATCGCCGCCATCGTCTGCGCCGACGCCTCGGACGCACGCCGCCTGCAGGATGAAATCGCCTTCTTTGCCCCCGAGCTGCGCTGCGCGCTGTTCCCGGACTGGGAGACGCTGCCCTACGATCATTTCTCGCCGCACCAGGATCTGATCAGCGAGCGCCTCTCCACGCTCTGGCGCATCCGCGAGGCGGAAGCGGACGTGGTGCTGGTGCCGGCGACCACCGCGCTCTACCGGCTGGCGCCACCCTCCTTCCTCGCGGGCTACACCTTCCATTTCAAGACCGGGCAGAGGCTCAACGAAGCCAAGCTGCGCGCGCAGCTCACGCTGGCGGGCTACCAGCACGTGGGGCAGGTGGTGGGCCACGGCGAATACGCGGTGCGCGGCGGACTGATCGACCTCTACCCCATGGGCTCGCCGCAGCCGCTGCGCGTCGATCTGTTCGACGACGAGATCGACTCCATCCGCACCTTCGACCCCGACACGCAGCGCAGCCTCTACCCCGTGCCCGAGGTGCGCCTGCTGCCCGGACGCGAGTTTCCGATGGACGAGGAGGCACGCACGCGCTTTCGCAACCGCTGGCGCGAGCTGCTGGAGGGCGACCCGACCAAGAGCCGCATCTACAAGGACATGGGCGCGGGCCTGGCGACCGCGGGCATTGAATACTACCTGCCGCTGTTCTTCGAGCAGACCGCCACGGTCTTTGATTACCTGGGCGATGCCGCCACGCTGGTGCTGCATGGCGACCTGGAGGCGGCGTTCCACCGCTTCTGGCAGGACACGCGCGAGCGCCACCGCTTGCTGGCGGGCGACCCCGAGCACCCCGCGCTGCCGCCCGAGGCGCTGTTCCTCAGCGCCGAGCAGTTCTACGCCAGCGCCAGGCCGCACCCGCAGCTATCGCTCAGGCAGGGTTCACTCCCTCGCCCCTCCGGGGAGAGGGTTGGGGAGAGGGGCGCAGAAGGACAGGCTGCGCCCGAGACAGCCCCCACCCCTGCCCTCCCCCAGGGGGGGAGGGTGGAACCGGGTGCGCCCCCGCAGAGCGGGAGGGTGGAATTCACGGCGCTGCCGGATCTGACGGCCGTGCGCGGCGCGGAAGACCCGATTGCCAAGCTGCAGGCCCACATCCAGCGCACGCCGCACCGCGTGCTGCTGCTGGCCGAGAGTGACGGCCGGCGCGAGAGCCTGCTGGACTTCCTGCGCGCCAGCCACCTGAACCCGCCGGCCTTCGATTCGCTGGAAGAATTTCTCGGCGCGCAGGGCGAGCGCGTGGGCATCGCCACCTCGGTGCTCGCCAGCGGCTTCGCCTGGGTGGAAGAAGGCATCGACTTCGTCACCGAAACCGAACTGTTTGCAGCCGCAGGCGGCACCGTGCGCCGGCGCAGGAAGCAGGAGCAGACCAGCGACCTGGAATCCATGATCAAGGACCTCGCCGAGCTCCAGATCGGCGACCCTGTCGTCCATGCGCAGCACGGCATCGGCCGCTACCGGGGCCTGGTCAACATGGACATGGGGCAGAAGAACCCCGACGGCACGCCTGCGCTGCAGGAATTCCTGCACCTGGAATACGCCGACAAGGCCACGCTCTATGTGCCGGTAAGCCAGCTGCAGCAGATCAGCCGCTACAGCGGCATCGCGGGCGACGAAGCGCCGCTGCACAAGCTCGGCGGCAACCAGTGGGAAAAGGCCAAGAGAAAAGCCGCCGAGCAGGTGCGCGACAGCGCCGCCGAGCTGCTCAACATCTACGCCCGCCGCGCCGCGCGCGAGGGCTTTGCCTTCCGCTTCTCGCCACAGGATTACGAAGCCTTCGTGAGCGACTTCGGCTTCGAGGAAACCGCCGACCAGAACGCCGCGATCCACGCCGTCATCCAGGACATGATCAGCCCGCGCCCCATGGATCGCCTGGTCTGCGGCGACGTGGGCTTTGGCAAGACCGAAGTCGCGCTGCGCGCCGCCTTCATCGCCGTCACCGGCGGCAAGCAGGTGGCGCTGCTCGCGCCGACCACGCTGCTGGCCGAGCAGCATTACCAGACGCTGGTCGATCGCTTCGCGCGCTGGCCGGTGAAGGTCGCGCAGGTCAGCCGCTTCGCCTCGGGCAAGGAAACCACTGCCGCGCTCAAGGGCCTGGCCGAAGGCGCGGTGGACATCGTCGTCGGCACGCACAAGCTGCTCTCGCAGTCCACCAAGTTCAAGAACCTGGGCCTCTTGATCATCGACGAAGAGCACCGTTTCGGCGTGCGCCACAAGGAGGCGATGAAAGCCATGCGCGCCGAAGTGGATGTGCTCACGCTGACCGCCACGCCGATTCCGCGCACCATGGGCATGGCGCTGGAAGGCCTGCGCGATCTCTCGGTGATCGCCACCGCGCCGCAGCGGCGTCTGGCGATCAAGACCTTTCTGCGCGAGGAAAACCAGGGCGTGATCCGCGAAGCGGTGCTGCGCGAATTGAAGCGCGGCGGGCAGGTGTACTTCCTGCACAACGAGGTGGAAACGATAGAGCACCGGCGCGAGGCGCTCGCCGCCATCCTGCCCGAGGCGCGCATCGCCGTGGCCCACGGCCAGATGCCGGAGCGGCAGCTGGAGCACGTGATGCGCGATTTCGTGGCCCAGCGCACCAATGTGCTGCTGTGCTCGACCATCATCGAAACCGGCATCGACGTGCCGACGGCCAATACCATCCTCATCAGCCGCGCCGACAAGTTCGGCCTGGCGCAGCTGCACCAGCTGCGCGGTCGCGTGGGCCGCAGCCACCACCAGGCCTACGCCTACCTCATGGTGCCGGATGTGCACGGACTCAAGGGCCACGCGGCGCAGCGCCTGGAGGCGATCCAGCAGATGGAGGAACTGGGCAGCGGCTTTTACCTCGCGATGCACGACCTGGAAATCCGCGGCGCCGGCGAGGTGCTGGGCGAGAACCAGTCAGGCAACATGGTCGAGGTGGGGTTCCAGCTCTACAACGAGATGCTGGCCGAGGCCGTGCGCTGCCTCAAGGCCGGCAAGGAGCCCGACCTGCTCGCACCGATGCAGGCGACGACCGACATCAATCTGCACGCCCCGGCGCTGCTGCCTTCGGATTACTGCGCCGACGTGCAGACGCGCCTGTCGCTCTACAAAAAACTGGCCACCGCGCATACCAGCGCGCAGATCGACACGCTGCTGGAAGAAATCGTCGACCGCTTCGGCAAGCTGCCGGCCCAGGCGCAGACCCTGATCGACACCCACCGCCTGCGCGTACTGTGCGAACCGTACGGCGTGACCAAGGTGGACGCAGCCCCCGGCGTGATCAGCATCAGCTTCACCCCGCAGCCGCCCATCGACCCCATGGCCATCATCCGGCTGGTGCAGAAAAACCGCGACATCAAGCTGGCGGGCAACGAGAAACTGCGGATTGAGCGCGCGCTACCCGAGCCGAACCTGCGCGCGCAGATGGTGCGTGACCTGCTGCGCAGCCTGGGTCAGCCAGAACGCGAAGCCGTGGCGGCCTGA
PROTEIN sequence
Length: 1197
MQLPTLTAGKRFTLHRCAGSSDALLLSRLAQSVRADRRIAAIVCADASDARRLQDEIAFFAPELRCALFPDWETLPYDHFSPHQDLISERLSTLWRIREAEADVVLVPATTALYRLAPPSFLAGYTFHFKTGQRLNEAKLRAQLTLAGYQHVGQVVGHGEYAVRGGLIDLYPMGSPQPLRVDLFDDEIDSIRTFDPDTQRSLYPVPEVRLLPGREFPMDEEARTRFRNRWRELLEGDPTKSRIYKDMGAGLATAGIEYYLPLFFEQTATVFDYLGDAATLVLHGDLEAAFHRFWQDTRERHRLLAGDPEHPALPPEALFLSAEQFYASARPHPQLSLRQGSLPRPSGERVGERGAEGQAAPETAPTPALPQGGRVEPGAPPQSGRVEFTALPDLTAVRGAEDPIAKLQAHIQRTPHRVLLLAESDGRRESLLDFLRASHLNPPAFDSLEEFLGAQGERVGIATSVLASGFAWVEEGIDFVTETELFAAAGGTVRRRRKQEQTSDLESMIKDLAELQIGDPVVHAQHGIGRYRGLVNMDMGQKNPDGTPALQEFLHLEYADKATLYVPVSQLQQISRYSGIAGDEAPLHKLGGNQWEKAKRKAAEQVRDSAAELLNIYARRAAREGFAFRFSPQDYEAFVSDFGFEETADQNAAIHAVIQDMISPRPMDRLVCGDVGFGKTEVALRAAFIAVTGGKQVALLAPTTLLAEQHYQTLVDRFARWPVKVAQVSRFASGKETTAALKGLAEGAVDIVVGTHKLLSQSTKFKNLGLLIIDEEHRFGVRHKEAMKAMRAEVDVLTLTATPIPRTMGMALEGLRDLSVIATAPQRRLAIKTFLREENQGVIREAVLRELKRGGQVYFLHNEVETIEHRREALAAILPEARIAVAHGQMPERQLEHVMRDFVAQRTNVLLCSTIIETGIDVPTANTILISRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDVHGLKGHAAQRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMVEVGFQLYNEMLAEAVRCLKAGKEPDLLAPMQATTDINLHAPALLPSDYCADVQTRLSLYKKLATAHTSAQIDTLLEEIVDRFGKLPAQAQTLIDTHRLRVLCEPYGVTKVDAAPGVISISFTPQPPIDPMAIIRLVQKNRDIKLAGNEKLRIERALPEPNLRAQMVRDLLRSLGQPEREAVAA*