ggKbase home page

SCNpilot_solid_1_scaffold_111_25

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(26644..27105)

Top 3 Functional Annotations

Value Algorithm Source
Putative anti-sigma factor n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MG59_BORPB similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 124.0
  • Bit_score: 97
  • Evalue 1.20e-17
btrW; anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 124.0
  • Bit_score: 97
  • Evalue 3.30e-18
Putative anti-sigma factor {ECO:0000313|EMBL:CCJ62266.1}; TaxID=568706 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussi similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 124.0
  • Bit_score: 97
  • Evalue 1.60e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGACAGTCCACGCCCCCCGGCACCCGTGGCCCGATTGGCAGGGTGAGCCGGCGCAGTTTGCGCCAGGCCGCGGAGCGCAGGCAGTGCAGGCGGCCATCGACTGGCTCGAGTCGCTGTGCGGGCAATGGACCTTGCCGGGCAAGCTCGCGCTGGCCATCGGCCTGTGCGCCGATGAGCTCCTCGCGAATGTGACATCGCATGCGCGGCGACCGGATGGATCGGCCGCCGAAATTGGACTGCGCCTTGGCAAGCTGGCGGGTGGCATCGGCCTGCTGGTCAGCGATGATGGCGCGGTGTTTGACCTGACCGCGCAGGAAAGCCCCGAGCTGGCGGCCAGCCTGGACGATGCCGTGCCGGGTGGACATGGCCTGAGGCTGATACGCCACTACACGCGGGCCATGCACTATCGCCGCGAGGCCGGGCGCAACCAGCTGCTGCTGGAATTTGACTATCCCTCCTGA
PROTEIN sequence
Length: 154
MTVHAPRHPWPDWQGEPAQFAPGRGAQAVQAAIDWLESLCGQWTLPGKLALAIGLCADELLANVTSHARRPDGSAAEIGLRLGKLAGGIGLLVSDDGAVFDLTAQESPELAASLDDAVPGGHGLRLIRHYTRAMHYRREAGRNQLLLEFDYPS*