ggKbase home page

SCNpilot_solid_1_scaffold_1519_1

Organism: SCNPILOT_SOLID_1_Burkholderiales_65_210

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 3..521

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 172.0
  • Bit_score: 280
  • Evalue 1.20e-72
DNA-directed RNA polymerase subunit beta' n=2 Tax=Alicycliphilus denitrificans RepID=E8TVM6_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 172.0
  • Bit_score: 280
  • Evalue 8.40e-73
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 172.0
  • Bit_score: 280
  • Evalue 2.40e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
TACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGCCAGATGCTGCGCCGCGTCGTGATCGACAACCCGGGCGAGTCGAACTACATCCTGGGCGAACAGGTCGAGCGTTCCGAGGTGCTCAACACCAACGAGGCGCTGCAGAAGGACGGCAAGATTCCGGCCACCTTCACCAACCTGCTGCTGGGCATCACCAAGGCCTCGCTGTCCACCGACAGCTTCATCTCGGCGGCGTCGTTCCAGGAGACCACCCGCGTGCTGACCGAGGCGGCCATCATGGGCAAGCGCGACGAGCTGCGTGGCCTGAAGGAGAACGTCATCGTCGGCCGCCTGATCCCGGCGGGCACCGGCCTGGCCTACCACCAGGCGCGCAAGGTCAAGGATGCGATGGACGAGGCCGAGCGCCGCGCCATCGACGAGGCGGAGGCGCAGGAGCTCGCCGCCAGCGCGGATGGCGAAGTAGCCGCCGTTGCGCACGAAGGGGACGGCGAAGCGGCGCAGTAA
PROTEIN sequence
Length: 173
YRLQGVKINDKHIEVIVRQMLRRVVIDNPGESNYILGEQVERSEVLNTNEALQKDGKIPATFTNLLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKVKDAMDEAERRAIDEAEAQELAASADGEVAAVAHEGDGEAAQ*