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SCNpilot_solid_1_scaffold_1519

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1519_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..521
DNA (519bp) protein (173aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=2 Tax=Alicycliphilus denitrificans RepID=E8TVM6_ALIDB
DNA-directed RNA polymerase subunit beta'
SCNpilot_solid_1_scaffold_1519_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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576..1136
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003690DA3
Uncharacterized protein {ECO:0000313|EMBL:GAD22592.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_1519_3
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1145..2485
DNA (1341bp) protein (447aa)
Sun protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH44_ACIET rbh
sun protein
Sun protein {ECO:0000313|EMBL:ACM34672.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (D
SCNpilot_solid_1_scaffold_1519_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2517..3131
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D52D2
Uncharacterized protein {ECO:0000313|EMBL:GAD22594.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_solid_1_scaffold_1519_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3128..5428
DNA (2301bp) protein (767aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Aci
Multi-sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCM4_ACISJ rbh
SCNpilot_solid_1_scaffold_1519_6
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5471..6166
DNA (696bp) protein (232aa)
Two component transcriptional regulator, Fis family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q8L1_ACIAP rbh
Fis family two component transcriptional regulator
Two component transcriptional regulator, Fis family {ECO:0000313|EMBL:ABM35062.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
SCNpilot_solid_1_scaffold_1519_trna_1
unknown

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6220..6292
DNA (73bp)
transferRNA
SCNpilot_solid_1_scaffold_1519_7
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6529..7959
DNA (1431bp) protein (477aa)
Putative integrase n=1 Tax=mine drainage metagenome RepID=E6QX08_9ZZZZ
putative integrase
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_solid_1_scaffold_1519_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8549..8773)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QX16_9ZZZZ
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_solid_1_scaffold_1519_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8951..9265)
DNA (315bp) protein (105aa)
Putative single-strand binding protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CNX2_THIA3
Putative single-strand binding protein
Putative single-strand binding protein {ECO:0000313|EMBL:CAZ90250.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans
SCNpilot_solid_1_scaffold_1519_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9333..9980)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VW59_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39887.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthale
SCNpilot_solid_1_scaffold_1519_11
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10083..11309)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C442_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20637.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_solid_1_scaffold_1519_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12156..12776
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C441_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL20636.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp
hypothetical protein
SCNpilot_solid_1_scaffold_1519_13
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12920..13546
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C440_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDS48549.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_
hypothetical protein
SCNpilot_solid_1_scaffold_1519_14
unknown

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13770..14267
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1519_15
unknown

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14333..15727
DNA (1395bp) protein (465aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1519_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15988..16134
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3Z0_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU38109.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
SCNpilot_solid_1_scaffold_1519_17
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16335..16553
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YMY5_9BURK
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADX56166.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholde
Displaying 18 items

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