ggKbase home page

SCNpilot_solid_1_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_15_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(850..1974)
DNA (1125bp) protein (375aa)
Cephalosporin-C deacetylase {ECO:0000313|EMBL:AEI48164.1}; EC=3.1.1.41 {ECO:0000313|EMBL:AEI48164.1};; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytop
Cephalosporin-C deacetylase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ECV6_RUNSL rbh
cephalosporin-C deacetylase
SCNpilot_solid_1_scaffold_15_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2279..4597
DNA (2319bp) protein (773aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003621946 rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACU63812.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
TonB-dependent receptor
SCNpilot_solid_1_scaffold_15_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4603..5400
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D7930
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ26107.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginib
hypothetical protein
SCNpilot_solid_1_scaffold_15_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5682..6086
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCD1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59514.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_solid_1_scaffold_15_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6200..6418
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU93_CHIPD
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
SCNpilot_solid_1_scaffold_15_6
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6443..6559
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2M4_OWEHD
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia
SCNpilot_solid_1_scaffold_15_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


6653..7033
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIA1_NIAKG
30S ribosomal protein S13
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_solid_1_scaffold_15_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


7122..7526
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Segetibacter koreensis RepID=UPI00035EBBAF
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DS
SCNpilot_solid_1_scaffold_15_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


7660..8265
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI99_NIAKG rbh
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
SCNpilot_solid_1_scaffold_15_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8376..9377
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI98_NIAKG
DNA-directed RNA polymerase subunit alpha
SCNpilot_solid_1_scaffold_15_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


9553..10098
DNA (546bp) protein (182aa)
50S ribosomal protein L17 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI97_NIAKG
50S ribosomal protein L17P
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niast
SCNpilot_solid_1_scaffold_15_12
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10173..11627
DNA (1455bp) protein (485aa)
Sulfatase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L117_HALH1 rbh
sulfatase
Sulfatase {ECO:0000313|EMBL:AEE51604.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (
SCNpilot_solid_1_scaffold_15_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11756..12850
DNA (1095bp) protein (365aa)
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl phosphate synthase small subunit n=1 Tax=Niabella aurantiaca RepID=UPI0003796AA9 rbh
SCNpilot_solid_1_scaffold_15_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12935..13360
DNA (426bp) protein (142aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI95_NIAKG
3-dehydroquinate dehydratase
SCNpilot_solid_1_scaffold_15_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13499..15883
DNA (2385bp) protein (795aa)
Copper-exporting ATPase {ECO:0000313|EMBL:AEV98295.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AEV98295.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373E71D rbh
Copper-exporting ATPase
SCNpilot_solid_1_scaffold_15_16
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16258..16425
DNA (168bp) protein (56aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTL8_SOLCM
cbb3-type cytochrome oxidase maturation protein
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:AFD06476.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriac
SCNpilot_solid_1_scaffold_15_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16441..18579
DNA (2139bp) protein (713aa)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:AEV98297.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AEV98297.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD65_NIAKG rbh
cytochrome c oxidase, cbb3-type subunit I
SCNpilot_solid_1_scaffold_15_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18601..18771
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD66_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98298.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_15_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18782..19945
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364A149 rbh
Cbb3-type cytochrome c oxidase subunit III {ECO:0000313|EMBL:GAO45174.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" sou
cytochrome c class I
SCNpilot_solid_1_scaffold_15_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19969..21408
DNA (1440bp) protein (480aa)
Cytochrome c oxidase accessory protein CcoG n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD68_NIAKG
Cytochrome C oxidase {ECO:0000313|EMBL:KIC90582.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter s
cytochrome c oxidase accessory protein CcoG
SCNpilot_solid_1_scaffold_15_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21585..22019
DNA (435bp) protein (145aa)
FixH family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD69_NIAKG
FixH family protein
FixH family protein {ECO:0000313|EMBL:AEV98301.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (stra
SCNpilot_solid_1_scaffold_15_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22019..22732
DNA (714bp) protein (238aa)
Integral membrane protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD70_NIAKG
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AEV98302.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis
SCNpilot_solid_1_scaffold_15_23
unknown

Not on your lists

23239..23418
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_15_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23886..25352
DNA (1467bp) protein (489aa)
RHS repeat-associated core domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA78_NIAKG
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AEW03416.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niast
SCNpilot_solid_1_scaffold_15_25
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25644..25934)
DNA (291bp) protein (97aa)
Plasmid stabilization system n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLI3_NIAKG
Plasmid stabilization system protein {ECO:0000313|EMBL:GAF04797.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrin
plasmid stabilization system
SCNpilot_solid_1_scaffold_15_26
unknown

Not on your lists

comp(25934..26152)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_15_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26164..26505)
DNA (342bp) protein (114aa)
Transcriptional regulator, XRE family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM01_CHIPD
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACU62215.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chit
SCNpilot_solid_1_scaffold_15_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26862..27665)
DNA (804bp) protein (268aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNP1_NIAKG rbh
pyrroline-5-carboxylate reductase
SCNpilot_solid_1_scaffold_15_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27668..28708)
DNA (1041bp) protein (347aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacter
ADP-glyceromanno-heptose 6-epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNP2_NIAKG
ADP-glyceromanno-heptose 6-epimerase
SCNpilot_solid_1_scaffold_15_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28710..29993)
DNA (1284bp) protein (428aa)
Acetyl-CoA hydrolase/transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TET5_NIAKG rbh
4-hydroxybutyrate CoA-transferase {ECO:0000313|EMBL:KIC95132.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flav
acetyl-CoA hydrolase/transferase rbh
Displaying items 1-30 of 176 in total

View Taxonomy