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SCNpilot_solid_1_scaffold_49

Search features with annotation key words

Displaying items 61-90 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_49_61
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(78157..78483)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367BC15
iron-sulfur cluster assembly accessory protein
Iron-sulfur cluster assembly accessory protein {ECO:0000313|EMBL:ACU60823.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" sou
SCNpilot_solid_1_scaffold_49_62
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

78604..79446
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEA2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97293.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_49_63
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

79491..79982
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF84_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97294.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_49_64
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80077..80646
DNA (570bp) protein (190aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000371DD34
5-formyltetrahydrofolate cyclo-ligase
SCNpilot_solid_1_scaffold_49_65
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

80636..81712
DNA (1077bp) protein (359aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380DEDD
tetraacyldisaccharide 4'-kinase
SCNpilot_solid_1_scaffold_49_66
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

81721..83751
DNA (2031bp) protein (677aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphin
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003630E68 rbh
ribonuclease R
SCNpilot_solid_1_scaffold_49_67
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

84045..85010
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364E7C3 rbh
Polyprenyl synthetase {ECO:0000313|EMBL:KIC90047.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter
geranyltranstransferase
SCNpilot_solid_1_scaffold_49_68
unknown

Not on your lists

comp(84930..85247)
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_49_69
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

85305..86999
DNA (1695bp) protein (565aa)
Amino acid permease-associated region n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRR0_HALH1
Amino acid transporter {ECO:0000313|EMBL:KIF34182.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
amino acid permease
SCNpilot_solid_1_scaffold_49_70
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

87217..87450
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUS3_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17894.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_solid_1_scaffold_49_71
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

87460..87756
DNA (297bp) protein (99aa)
Plasmid stabilization system n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GUS5_9SPHI
Plasmid stabilization system protein {ECO:0000313|EMBL:KIA91781.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Ped
plasmid stabilization protein
SCNpilot_solid_1_scaffold_49_72
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(87829..89073)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037612AE
hypothetical protein Tax=GWA2_Bacteroidetes_31_9_curated
hypothetical protein
SCNpilot_solid_1_scaffold_49_73
unknown

Not on your lists

comp(89553..90539)
DNA (987bp) protein (329aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_49_74
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

91005..91454
DNA (450bp) protein (150aa)
DoxX family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAD3_CHIPD
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:ACU61137.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis
SCNpilot_solid_1_scaffold_49_75
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

91593..92027
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S204_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU20726.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cau
hypothetical protein
SCNpilot_solid_1_scaffold_49_76
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(92253..94034)
DNA (1782bp) protein (594aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1463156 species="Bacteria; Bac
Arginine--tRNA ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJI0_9SPHI rbh
arginyl-tRNA synthetase
SCNpilot_solid_1_scaffold_49_77
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

94133..95254
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5F5_9SPHI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29307.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mu
hypothetical protein
SCNpilot_solid_1_scaffold_49_78
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

95265..95672
DNA (408bp) protein (136aa)
GCN5-related N-acetyltransferase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGH6_RUNSL
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEI49079.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain
SCNpilot_solid_1_scaffold_49_79
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(95687..96532)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPQ6_HALH1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52156.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
SCNpilot_solid_1_scaffold_49_80
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(96576..97601)
DNA (1026bp) protein (342aa)
Methionine synthase vitamin-B12 independent n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPQ7_HALH1 rbh
vitamin-B12 independent methionine synthase
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:AEE52157.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" sou
SCNpilot_solid_1_scaffold_49_81
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(97616..98395)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GBT3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH51357.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_solid_1_scaffold_49_82
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(98405..99298)
DNA (894bp) protein (298aa)
N-acylmannosamine kinase {ECO:0000313|EMBL:AEI51106.1}; EC=2.7.1.60 {ECO:0000313|EMBL:AEI51106.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" s
N-acylmannosamine kinase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQ96_RUNSL rbh
N-acylmannosamine kinase
SCNpilot_solid_1_scaffold_49_83
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(99322..100113)
DNA (792bp) protein (264aa)
bacC3; short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCH00381.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CCH00381.1};; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagac
Short-chain dehydrogenase/reductase SDR n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8C8_9BACT rbh
SCNpilot_solid_1_scaffold_49_84
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

100332..102164
DNA (1833bp) protein (611aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM94_CHIPD rbh
Putative L,D-transpeptidase {ECO:0000313|EMBL:GAO43278.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumib
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_solid_1_scaffold_49_85
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102324..102716
DNA (393bp) protein (131aa)
Rare lipoprotein A n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A2B4_METMM
rare lipoprotein A
Rare lipoprotein A {ECO:0000313|EMBL:AEF98926.1}; Flags: Precursor;; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Met
SCNpilot_solid_1_scaffold_49_86
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

102806..104149
DNA (1344bp) protein (448aa)
OmpA/MotB domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQY6_NIAKG
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEV97885.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="N
SCNpilot_solid_1_scaffold_49_87
unknown

Not on your lists

comp(104463..104579)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_49_88
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

104844..105614
DNA (771bp) protein (257aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI64_NIAKG
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KIC90229.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Fla
Exonuclease RNase T and DNA polymerase III
SCNpilot_solid_1_scaffold_49_89
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

105673..106452
DNA (780bp) protein (260aa)
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:AEW00680.1}; EC=2.4.1.83 {ECO:0000313|EMBL:AEW00680.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteri
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036A3A99 rbh
dolichyl-phosphate beta-D-mannosyltransferase
SCNpilot_solid_1_scaffold_49_90
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

106534..107415
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI62_NIAKG
Membrane protein {ECO:0000313|EMBL:KIC92929.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solis
hypothetical protein
Displaying items 61-90 of 117 in total

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