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SCNpilot_solid_1_scaffold_49

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_49_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

326..787
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Q6_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC95030.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_49_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

847..3318
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6Q8_NIAKG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97911.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_49_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3557..4597
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BF5C7 rbh
hypothetical protein
UPF0176 protein Niako_1543 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
SCNpilot_solid_1_scaffold_49_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4739..5875)
DNA (1137bp) protein (379aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:AEV97913.1}; EC=3.1.1.31 {ECO:0000313|EMBL:AEV97913.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteria
6-phosphogluconolactonase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6R0_NIAKG rbh
6-phosphogluconolactonase rbh
SCNpilot_solid_1_scaffold_49_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5881..6810)
DNA (930bp) protein (310aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=12
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6R3_NIAKG rbh
phosphoribosylaminoimidazolesuccinocarboxamide synthase
SCNpilot_solid_1_scaffold_49_6
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7536..9044)
DNA (1509bp) protein (503aa)
Putative aldehyde dehydrogenase n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3KDP9_PSEPF rbh
aldehyde dehydrogenase
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
SCNpilot_solid_1_scaffold_49_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9141..10004)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366F5FA rbh
Helix-turn-helix, AraC domain-containing protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Helix-turn-helix, AraC domain-containing protein
SCNpilot_solid_1_scaffold_49_8
unknown

Not on your lists

comp(10182..10538)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370945C
SCNpilot_solid_1_scaffold_49_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11292..11918)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQ75_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39508.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_solid_1_scaffold_49_10
unknown

Not on your lists

comp(12043..12279)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_49_11
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12319..16038)
DNA (3720bp) protein (1240aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6B4D1 rbh
Bacterial ig-like domain-containing protein {ECO:0000313|EMBL:AHM59698.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;"
bacterial ig-like domain-containing protein
SCNpilot_solid_1_scaffold_49_12
unknown

Not on your lists

comp(16068..16565)
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_49_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17038..19950
DNA (2913bp) protein (971aa)
TonB-denpendent receptor n=1 Tax=Niabella aurantiaca RepID=UPI00037A0C08 rbh
TonB-denpendent receptor
TonB-denpendent receptor {ECO:0000313|EMBL:AHF14945.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 194
SCNpilot_solid_1_scaffold_49_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20339..21823
DNA (1485bp) protein (495aa)
Cerebroside-sulfatase {ECO:0000313|EMBL:AEW00056.1}; EC=3.1.6.8 {ECO:0000313|EMBL:AEW00056.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
Cerebroside-sulfatase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRD4_NIAKG rbh
Cerebroside-sulfatase rbh
SCNpilot_solid_1_scaffold_49_15
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21917..22909
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PB9_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:KJJ37488.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladiv
hypothetical protein
SCNpilot_solid_1_scaffold_49_16
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22910..24013)
DNA (1104bp) protein (368aa)
GTP-binding protein YchF n=1 Tax=Segetibacter koreensis RepID=UPI00037DA8EE rbh
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Ps
SCNpilot_solid_1_scaffold_49_17
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24409..25647
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6ECG6_9SPHI
Membrane protein {ECO:0000313|EMBL:KEQ31147.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus
nucleoside recognition family protein
SCNpilot_solid_1_scaffold_49_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25727..26317
DNA (591bp) protein (197aa)
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=B7B607_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN10504.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sour
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_solid_1_scaffold_49_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26487..27638
DNA (1152bp) protein (384aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC95908.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
FecR protein id=2885643 bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
FecR anti-FecI sigma factor
SCNpilot_solid_1_scaffold_49_20
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27764..31159
DNA (3396bp) protein (1132aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7J801_9PORP rbh
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB57416.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" so
membrane protein
SCNpilot_solid_1_scaffold_49_21
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31171..32661
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZUE8_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB56065.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldste
SusD/RagB family lipoprotein
SCNpilot_solid_1_scaffold_49_22
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32871..33761)
DNA (891bp) protein (297aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJC2_RUNSL rbh
xylose isomerase domain-containing protein
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEI50416.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.
SCNpilot_solid_1_scaffold_49_23
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33767..35071)
DNA (1305bp) protein (435aa)
Oxidoreductase domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJC1_RUNSL rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEI50415.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slith
SCNpilot_solid_1_scaffold_49_24
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35635..37062
DNA (1428bp) protein (476aa)
alpha-L-fucosidase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3B0FA rbh
alpha-L-fucosidase
Glycoside hydrolase family 29 (Alpha-L-fucosidase) {ECO:0000313|EMBL:ADZ79911.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacte
SCNpilot_solid_1_scaffold_49_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37392..40298
DNA (2907bp) protein (969aa)
Excinuclease ABC, A subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK90_NIAKG rbh
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis
SCNpilot_solid_1_scaffold_49_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40415..40915
DNA (501bp) protein (167aa)
5 nucleotidase deoxy cytosolic type C n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK91_NIAKG
5' nucleotidase
5 nucleotidase deoxy cytosolic type C {ECO:0000313|EMBL:AEV96525.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastel
SCNpilot_solid_1_scaffold_49_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

40987..41475
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035F5F24
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
SCNpilot_solid_1_scaffold_49_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41607..42197
DNA (591bp) protein (197aa)
RNA polymerase sigma factor n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R3_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
SCNpilot_solid_1_scaffold_49_29
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42331..43383
DNA (1053bp) protein (351aa)
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YHI1_9SPHI
Contig58, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76644.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
FecR protein
SCNpilot_solid_1_scaffold_49_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

43613..47053
DNA (3441bp) protein (1147aa)
collagen-binding protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003711C8A rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT95918.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strai
TonB-dependent receptor plug
Displaying items 1-30 of 117 in total

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