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SCNpilot_solid_1_scaffold_49_18

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 25727..26317

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=3 Tax=Parabacteroides RepID=B7B607_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 182.0
  • Bit_score: 128
  • Evalue 7.90e-27
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN10504.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 34.8
  • Coverage: 178.0
  • Bit_score: 127
  • Evalue 1.90e-26
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 172.0
  • Bit_score: 125
  • Evalue 1.90e-26

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Taxonomy

Parabacteroides johnsonii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
TTGGATTCATATAGCGAGCAGGAAATGGTACGGCTGGTTGCAGCCGGAAGTGAACCTGCTTTCCGGCAACTGTTTTACCAGTATCGGCCGAGGCTGATTGCTTTTGCGCTTGGCCTGTCCAAATCAGAACAGGCGGCAGAGGATATTGTACATGATGTCTTTCTTGGGTTATGGAAAAACCGGCAACGGCTGCCGGAAGTAGAGCATTTTAGCAACTATCTTTTTCGGGCGGTACAATACAGGACTCACCGGCAATTGCAGCGCAGGGTAAAAGAGGCACTGATTCTGGCCAGACTGCGACAGGAAGTATACGACGGAGATTTTATAGAACAACAGGAAATATTTACCCTTCAGGTCGTTCGGAATTTTCTAAAGCAAGGACTCGACAAACTCACTCCTCAGCAGCGAAGGATTTTTCTGCTTAGCCGGGAACTGGGTTTATCACATGCCCAAATTGCCGAAAGATTGGGAATTCAACCCCAAACGGTTAGTAACCATCTTTCTGACGCTTTGCGAATGCTACGGGATGAATTGGATATCTTTTACGGCCCACTGGCCGGCATCCCTTTTATTTTGCTGTCGGTTTCTTAA
PROTEIN sequence
Length: 197
LDSYSEQEMVRLVAAGSEPAFRQLFYQYRPRLIAFALGLSKSEQAAEDIVHDVFLGLWKNRQRLPEVEHFSNYLFRAVQYRTHRQLQRRVKEALILARLRQEVYDGDFIEQQEIFTLQVVRNFLKQGLDKLTPQQRRIFLLSRELGLSHAQIAERLGIQPQTVSNHLSDALRMLRDELDIFYGPLAGIPFILLSVS*