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SCNpilot_solid_1_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_108_1
unknown

Not on your lists

2..181
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_2
unknown

Not on your lists

comp(295..447)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_3
unknown

Not on your lists

609..1001
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_4
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1686..2861
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380C863
hypothetical protein Tax=GWA2_Bacteroidetes_40_15_curated
hypothetical protein
SCNpilot_solid_1_scaffold_108_5
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2902..3645
DNA (744bp) protein (248aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sp
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C10F5 rbh
nagB; glucosamine-6-phosphate deaminase
SCNpilot_solid_1_scaffold_108_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3677..5002
DNA (1326bp) protein (442aa)
major facilitator transporter n=1 Tax=Segetibacter koreensis RepID=UPI00037D626F rbh
glucose/galactose transporter
Glucose/galactose transporter {ECO:0000313|EMBL:ACU02998.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
SCNpilot_solid_1_scaffold_108_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5040..6224
DNA (1185bp) protein (395aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=485917 species=
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F2C49
N-acetylglucosamine-6-phosphate deacetylase
SCNpilot_solid_1_scaffold_108_8
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6344..8608
DNA (2265bp) protein (755aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036B21FB
Cytochrome C {ECO:0000313|EMBL:KEQ30972.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.
cytochrome C
SCNpilot_solid_1_scaffold_108_9
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8692..9723
DNA (1032bp) protein (344aa)
Regulatory protein GntR HTH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV64_PEDHD rbh
GntR family transcriptional regulator
Regulatory protein GntR HTH {ECO:0000313|EMBL:ACU06072.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter he
SCNpilot_solid_1_scaffold_108_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9756..10661)
DNA (906bp) protein (302aa)
Glycosyl transferase family 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NSN7_9SPHI rbh
glycosyl transferase rbh
Glycosyl transferase {ECO:0000313|EMBL:AHF16083.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;
SCNpilot_solid_1_scaffold_108_11
unknown

Not on your lists

10995..11165
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_12
unknown

Not on your lists

11147..11443
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11862..14186)
DNA (2325bp) protein (775aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T852_NIAKG rbh
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEV98003.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc
SCNpilot_solid_1_scaffold_108_14
unknown

Not on your lists

14446..14544
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_15
unknown

Not on your lists

14541..14660
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

15199..18477
DNA (3279bp) protein (1093aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAS2_NIAKG rbh
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
SCNpilot_solid_1_scaffold_108_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18496..20481
DNA (1986bp) protein (662aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THV1_NIAKG
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:AEV98546.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kor
SCNpilot_solid_1_scaffold_108_18
unknown

Not on your lists

20874..20978
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_19

Not on your lists

comp(21115..22527)
DNA (1413bp) protein (471aa)
MATE efflux family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB76_NIAKG rbh
MATE efflux family protein {ECO:0000313|EMBL:AIA16619.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
MATE efflux family protein
SCNpilot_solid_1_scaffold_108_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22786..24078
DNA (1293bp) protein (431aa)
Nucleoside:H symporter n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH0_RHOM4 rbh
nucleoside:H symporter
Nucleoside:H symporter {ECO:0000313|EMBL:ACY48628.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marin
SCNpilot_solid_1_scaffold_108_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24162..25340
DNA (1179bp) protein (393aa)
Oxidoreductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THW3_NIAKG rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEV98558.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
SCNpilot_solid_1_scaffold_108_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25431..26753)
DNA (1323bp) protein (441aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niast
Aspartokinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9U9_NIAKG rbh
aspartate kinase
SCNpilot_solid_1_scaffold_108_23
unknown

Not on your lists

comp(26765..26875)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_108_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26904..27326)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BEFFB
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
SCNpilot_solid_1_scaffold_108_25
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27572..28102
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000349D7B4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD03654.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCNpilot_solid_1_scaffold_108_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28424..28849
DNA (426bp) protein (142aa)
GtrA family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGL8_NIAKG
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:AEV98460.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (stra
SCNpilot_solid_1_scaffold_108_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29429..29926
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMM4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02012.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_108_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30094..30666
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMM3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02011.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_108_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30633..31451
DNA (819bp) protein (273aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; N
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMM2_NIAKG
putative signal transduction histidine kinase
SCNpilot_solid_1_scaffold_108_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31458..32117
DNA (660bp) protein (220aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMM1_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02009.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
Displaying items 1-30 of 103 in total

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