ggKbase home page

SCNpilot_solid_1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_110_1
unknown

Not on your lists

comp(636..1325)
DNA (690bp) protein (230aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_110_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1336..1920)
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO42297.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
SCNpilot_solid_1_scaffold_110_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3670..4155
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL73_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01914.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_110_4
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4177..4734)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RWH1_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ18911.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterel
SCNpilot_solid_1_scaffold_110_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4743..5627)
DNA (885bp) protein (295aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMF8_NIAKG
TraR/DksA family transcriptional regulator
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:AEW01946.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="N
SCNpilot_solid_1_scaffold_110_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(5632..9036)
DNA (3405bp) protein (1135aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
isoleucyl-tRNA synthase n=1 Tax=Segetibacter koreensis RepID=UPI000367F9DC rbh
isoleucyl-tRNA synthetase
SCNpilot_solid_1_scaffold_110_7
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9709..10296)
DNA (588bp) protein (196aa)
Protein YdjA n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYX5_9BACT
Protein YdjA {ECO:0000313|EMBL:EAY24411.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
nitroreductase
SCNpilot_solid_1_scaffold_110_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10543..10947)
DNA (405bp) protein (135aa)
GreA/GreB family elongation factor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSL7_CHIPD
GreA/GreB family elongation factor
GreA/GreB family elongation factor {ECO:0000313|EMBL:ACU64466.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitino
SCNpilot_solid_1_scaffold_110_9
unknown

Not on your lists

comp(11014..11253)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_110_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11535..12302)
DNA (768bp) protein (256aa)
Nitrous-oxide metabolic protein NosY n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDR9_NIAKG rbh
nitrous-oxide metabolic protein NosY
Nitrous-oxide metabolic protein NosY {ECO:0000313|EMBL:AEW01519.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.
SCNpilot_solid_1_scaffold_110_11
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12309..13013)
DNA (705bp) protein (235aa)
Copper-transport ATP-binding protein NosF n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNV1_9SPHI rbh
Copper-transport ATP-binding protein NosF {ECO:0000313|EMBL:EOR93391.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" sou
ABC transporter
SCNpilot_solid_1_scaffold_110_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13010..14281)
DNA (1272bp) protein (424aa)
Periplasmic copper-binding n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1A0_DYAFD rbh
copper-binding protein
Periplasmic copper-binding {ECO:0000313|EMBL:ACT91957.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain
SCNpilot_solid_1_scaffold_110_13
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14289..15314)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GWQ1_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR93389.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
hypothetical protein
SCNpilot_solid_1_scaffold_110_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15391..17385)
DNA (1995bp) protein (665aa)
Nitrous-oxide reductase {ECO:0000313|EMBL:ACT91955.1}; EC=1.7.2.4 {ECO:0000313|EMBL:ACT91955.1};; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagac
Nitrous-oxide reductase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W198_DYAFD rbh
nitrous-oxide reductase
SCNpilot_solid_1_scaffold_110_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17426..17911)
DNA (486bp) protein (162aa)
Cytochrome c class I n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W197_DYAFD
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ACT91954.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen
SCNpilot_solid_1_scaffold_110_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18089..18712
DNA (624bp) protein (208aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDS5_NIAKG
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEW01525.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Nia
SCNpilot_solid_1_scaffold_110_17
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18748..19968
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GPC3_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR93395.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
hypothetical protein
SCNpilot_solid_1_scaffold_110_18
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20009..21823
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXP9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC91852.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_110_19
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21958..23313)
DNA (1356bp) protein (452aa)
hemN1; oxygen-independent coproporphyrinogen-III oxidase (EC:1.3.99.22)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alc
Coproporphyrinogen III oxidase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUZ6_9BURK
SCNpilot_solid_1_scaffold_110_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23590..24024
DNA (435bp) protein (145aa)
Rrf2 family transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00036A0B85
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KIC95490.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="
BadM/Rrf2 family transcriptional regulator
SCNpilot_solid_1_scaffold_110_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24037..26205
DNA (2169bp) protein (723aa)
Cytochrome-c oxidase {ECO:0000313|EMBL:ACU63203.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACU63203.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; C
Cytochrome-c oxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCY9_CHIPD rbh
cytochrome C oxidase rbh
SCNpilot_solid_1_scaffold_110_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26226..27236
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DF118 rbh
cytochrome C oxidase
Cytochrome C oxidase {ECO:0000313|EMBL:AHF16944.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;
SCNpilot_solid_1_scaffold_110_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27316..27555
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037C0A66
Uncharacterized protein {ECO:0000313|EMBL:KIC95487.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_110_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27573..27977
DNA (405bp) protein (135aa)
Cytochrome c family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUN8_DYAFD
Cytochrome C {ECO:0000313|EMBL:KIC95518.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilva
cytochrome c family protein
SCNpilot_solid_1_scaffold_110_25
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27991..28386
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037FEC90
globin family protein
Globin family protein {ECO:0000313|EMBL:ADR22705.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23
SCNpilot_solid_1_scaffold_110_26
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28624..28974
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003763F85
Uncharacterized protein {ECO:0000313|EMBL:KHL00408.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
hypothetical protein
SCNpilot_solid_1_scaffold_110_27
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28990..29487
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361CFA9
Uncharacterized protein {ECO:0000313|EMBL:KIC95484.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
Hemerythrin HHE cation binding region
SCNpilot_solid_1_scaffold_110_28
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29598..30872)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365E11E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE52314.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
SCNpilot_solid_1_scaffold_110_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

30917..33889
DNA (2973bp) protein (991aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0X1_DYAFD rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT95426.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
TonB-dependent receptor plug
SCNpilot_solid_1_scaffold_110_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

33924..35453
DNA (1530bp) protein (510aa)
RagB/SusD domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0X0_DYAFD
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT95425.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fe
Displaying items 1-30 of 79 in total

View Taxonomy