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SCNpilot_solid_1_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_160_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..1078
DNA (1077bp) protein (359aa)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS2_NIAKG
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KIC89944.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Fl
4-hydroxyphenylpyruvate dioxygenase
SCNpilot_solid_1_scaffold_160_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1098..2255
DNA (1158bp) protein (386aa)
Homogentisate 12-dioxygenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPN5_9SPHI
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:KIC93392.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihum
homogentisate 1,2-dioxygenase
SCNpilot_solid_1_scaffold_160_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2268..3269
DNA (1002bp) protein (334aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG14_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO42058.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
fumarylacetoacetate (FAA) hydrolase
SCNpilot_solid_1_scaffold_160_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3250..4134
DNA (885bp) protein (295aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD8_NIAKG
flavin reductase domain-containing FMN-binding protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
flavin reductase domain-containing FMN-binding protein
SCNpilot_solid_1_scaffold_160_5
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4212..5807
DNA (1596bp) protein (532aa)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J0Y9_9SPHI
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
phosphoenolpyruvate carboxykinase
SCNpilot_solid_1_scaffold_160_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5819..6814
DNA (996bp) protein (332aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855, ECO:0000256|SAAS:SAAS00181
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGK5_NIAKG
D-fructose 1,6-bisphosphatase
SCNpilot_solid_1_scaffold_160_7
unknown

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comp(7057..7233)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_160_8
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(7199..8104)
DNA (906bp) protein (302aa)
dihydrodipicolinate synthetase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Dihydrodipicolinate synthetase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W118_DYAFD
dihydrodipicolinate synthetase
SCNpilot_solid_1_scaffold_160_9
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8224..9201)
DNA (978bp) protein (326aa)
carbohydrate esterase / alpha-galactosidase (EC:3.1.1.-)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteri
Carbohydrate esterase, family CE6 / Alpha-galactosidase, family GH27 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L8L5_ZOBGA
SCNpilot_solid_1_scaffold_160_10
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9198..10148)
DNA (951bp) protein (317aa)
oxidoreductase n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002558703 rbh
Aldo/keto reductase {ECO:0000313|EMBL:CDF79792.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;
oxidoreductase
SCNpilot_solid_1_scaffold_160_11
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10162..10992)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365096F
Strain DSM 12611 Contig02, whole genome shotgun sequence {ECO:0000313|EMBL:KIO54520.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
amidohydrolase
SCNpilot_solid_1_scaffold_160_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11014..12030)
DNA (1017bp) protein (339aa)
D-xylulose reductase {ECO:0000313|EMBL:AEI51079.1}; EC=1.1.1.9 {ECO:0000313|EMBL:AEI51079.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source
D-xylulose reductase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQ69_RUNSL rbh
D-xylulose reductase rbh
SCNpilot_solid_1_scaffold_160_13
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12093..13481)
DNA (1389bp) protein (463aa)
Putative aminopeptidase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BK45_ZUNPS rbh
aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:ADF51725.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda
SCNpilot_solid_1_scaffold_160_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13488..15077)
DNA (1590bp) protein (530aa)
Serine dehydratase alpha chain n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L563_HALH1 rbh
serine dehydratase subunit alpha
Serine dehydratase alpha chain {ECO:0000313|EMBL:AEE48784.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscom
SCNpilot_solid_1_scaffold_160_15

Not on your lists

comp(15101..17338)
DNA (2238bp) protein (746aa)
dppA2; dipeptidyl peptidase (EC:3.4.14.5)
Dipeptidyl-peptidase IV, family S9 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L8M5_ZOBGA rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM85818.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_solid_1_scaffold_160_16
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17379..18914)
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LGM9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKB49463.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
SCNpilot_solid_1_scaffold_160_17
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19035..21494)
DNA (2460bp) protein (820aa)
afcA6; alpha-L-fucosidase (EC:3.2.1.51)
Glycoside hydrolase family 95 n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T962_9PLAN rbh
Glycoside hydrolase family 95 {ECO:0000313|EMBL:EMI40318.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellu
SCNpilot_solid_1_scaffold_160_18
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21627..23099)
DNA (1473bp) protein (491aa)
hypothetical protein Tax=GWF2_Bacteroidetes_49_14_curated
Putative uncharacterized protein id=4018602 bin=GWF2_Bacteroidetes_49_14 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
hypothetical protein
SCNpilot_solid_1_scaffold_160_19
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23135..26305)
DNA (3171bp) protein (1057aa)
TonB-dependent receptor plug Tax=GWF2_Bacteroidetes_49_14_curated
TonB-dependent receptor plug id=4018601 bin=GWF2_Bacteroidetes_49_14 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
TonB-denpendent receptor
SCNpilot_solid_1_scaffold_160_20
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26633..28282)
DNA (1650bp) protein (550aa)
Sodium/glucose symporter id=4018603 bin=GWF2_Bacteroidetes_49_14 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
sodium/glucose symporter Tax=GWF2_Bacteroidetes_49_14_curated
sodium/glucose symporter
SCNpilot_solid_1_scaffold_160_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28396..29271)
DNA (876bp) protein (292aa)
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDP6_NIAKG rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEW01496.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niaste
SCNpilot_solid_1_scaffold_160_22
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29559..32426)
DNA (2868bp) protein (956aa)
Probable large, multifunctional secreted protein n=1 Tax=Algoriphagus machipongonensis RepID=A3I129_9BACT rbh
Probable large, multifunctional secreted protein {ECO:0000313|EMBL:EAZ80175.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algo
hypothetical protein
SCNpilot_solid_1_scaffold_160_23
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32570..34552)
DNA (1983bp) protein (661aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJN9_ZUNPS
Type IV secretory pathway VirD4 components-like protein {ECO:0000313|EMBL:ADF53737.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.
type IV secretory pathway VirD4 components-like protein
SCNpilot_solid_1_scaffold_160_24
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34594..35859)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000363C59E
Relaxase {ECO:0000313|EMBL:KGO80779.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
relaxase/mobilization nuclease
SCNpilot_solid_1_scaffold_160_25
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35844..36443)
DNA (600bp) protein (200aa)
Mobilization protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBX2_9SPHI
Mobilization protein {ECO:0000313|EMBL:EHQ27050.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibact
hypothetical protein
SCNpilot_solid_1_scaffold_160_26
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36479..37375)
DNA (897bp) protein (299aa)
DNA primase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP2_ZUNPS
DNA primase
DNA primase {ECO:0000313|EMBL:ADF53740.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM
SCNpilot_solid_1_scaffold_160_27
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37536..37817
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003735665
Uncharacterized protein {ECO:0000313|EMBL:KDN54688.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
SCNpilot_solid_1_scaffold_160_28
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37877..38353)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031AA9BB
DNA repair protein {ECO:0000313|EMBL:KIC89896.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp.
DNA repair protein
SCNpilot_solid_1_scaffold_160_29
unknown

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comp(38594..38692)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_160_30
unknown

Not on your lists

comp(38644..38862)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying items 1-30 of 65 in total

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