ggKbase home page

SCNpilot_solid_1_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_415_1
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(275..1675)
DNA (1401bp) protein (467aa)
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FDE8_9BACT rbh
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:EJF08251.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase
SCNpilot_solid_1_scaffold_415_2
bacterium UASB270, Bacteria

Not on your lists

1723..2304
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000375BB83
Uncharacterized protein {ECO:0000313|EMBL:GAK59789.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
SCNpilot_solid_1_scaffold_415_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2285..3574
DNA (1290bp) protein (430aa)
CinA-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI58_NIAKG rbh
competence/damage-inducible protein CinA
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (st
SCNpilot_solid_1_scaffold_415_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3705..5033
DNA (1329bp) protein (443aa)
Dihydrolipoyllysine-residue succinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI59_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90223.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
Dihydrolipoyllysine-residue succinyltransferase
SCNpilot_solid_1_scaffold_415_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5292..6011
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI60_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00677.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_415_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6023..6871)
DNA (849bp) protein (283aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=700598 species="Bacteria; Bacteroidete
Riboflavin biosynthesis protein RibF n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE91_NIAKG
riboflavin biosynthesis protein RibF
SCNpilot_solid_1_scaffold_415_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7114..8289
DNA (1176bp) protein (392aa)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Niabella soli DSM 19437 RepID=H1NMH8_9SPHI rbh
phosphoribosylformylglycinamidine cyclo-ligase
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:AHF14696.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source=
SCNpilot_solid_1_scaffold_415_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8361..8765)
DNA (405bp) protein (135aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIZ7_NIAKG
AsnC family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AEV97514.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="N
SCNpilot_solid_1_scaffold_415_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8928..9644)
DNA (717bp) protein (239aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacter
Dihydrodipicolinate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIZ9_NIAKG rbh
dihydrodipicolinate reductase
SCNpilot_solid_1_scaffold_415_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9684..10385)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037FA8AF
Uncharacterized protein {ECO:0000313|EMBL:GAO43313.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_415_11
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10369..11292)
DNA (924bp) protein (308aa)
chromosome partitioning protein ParB n=1 Tax=Segetibacter koreensis RepID=UPI0003697432
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KIC91430.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="F
parB-like partition protein
SCNpilot_solid_1_scaffold_415_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11270..12097)
DNA (828bp) protein (276aa)
Chromosome segregation ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ02_NIAKG rbh
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KIC94175.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="F
chromosome segregation ATPase
SCNpilot_solid_1_scaffold_415_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12184..12867)
DNA (684bp) protein (228aa)
Beta-lactamase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCE4_CHIPD rbh
beta-lactamase domain-containing protein rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:ACU59527.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
SCNpilot_solid_1_scaffold_415_14
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13020..13532
DNA (513bp) protein (171aa)
NADPH-dependent FMN reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ04_NIAKG
Putative oxidoreductase {ECO:0000313|EMBL:GAO43317.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
NADPH-dependent FMN reductase
SCNpilot_solid_1_scaffold_415_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13698..14945
DNA (1248bp) protein (416aa)
Metallophosphoesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ05_NIAKG rbh
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEV97522.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (s
SCNpilot_solid_1_scaffold_415_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15155..15751
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ08_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97525.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_415_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15858..18311
DNA (2454bp) protein (818aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPZ0_NIAKG
anti-sigma H sporulation factor LonB
SCNpilot_solid_1_scaffold_415_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18429..18824
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Moritella dasanensis RepID=UPI0002EB6BBF
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEV99982.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella
SCNpilot_solid_1_scaffold_415_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18915..20198
DNA (1284bp) protein (428aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBW8_NIAKG rbh
2-methylthioadenine synthetase {ECO:0000313|EMBL:KIC92726.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihu
MiaB-like tRNA modifying enzyme
SCNpilot_solid_1_scaffold_415_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20250..20576
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E4735
hypothetical protein
hypothetical protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_solid_1_scaffold_415_trna_1
unknown

Not on your lists

20702..20776
DNA (75bp)
transferRNA
SCNpilot_solid_1_scaffold_415_21
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21303..25361
DNA (4059bp) protein (1353aa)
Uncharacterized protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XIG7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS34629.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus
phage tail tape measure protein, TP901 family
SCNpilot_solid_1_scaffold_415_22
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25512..26906)
DNA (1395bp) protein (465aa)
ClpP class periplasmic serine protease n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPS3_SOLCM
ClpP class periplasmic serine protease
ClpP class periplasmic serine protease {ECO:0000313|EMBL:AFD05971.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Sol
SCNpilot_solid_1_scaffold_415_23
unknown

Not on your lists

27650..27769
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_415_24
unknown

Not on your lists

comp(27807..28115)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_415_25
unknown

Not on your lists

comp(28133..28597)
DNA (465bp) protein (155aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_415_26
unknown

Not on your lists

comp(28741..28923)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_415_27
unknown

Not on your lists

comp(29136..30194)
DNA (1059bp) protein (353aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_415_28
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30195..31523)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037EEC79
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD53789.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_solid_1_scaffold_415_29
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31611..33107)
DNA (1497bp) protein (499aa)
Phage/plasmid primase, P4 family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QLF9_SPILD rbh
phage/plasmid primase, P4 family
Phage/plasmid primase, P4 family {ECO:0000313|EMBL:CEA16994.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" sourc
Displaying items 1-30 of 39 in total

View Taxonomy