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SCNpilot_solid_1_scaffold_523

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_523_1
unknown

Not on your lists

550..825
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_523_2
unknown

Not on your lists

3960..4265
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_523_3
unknown

Not on your lists

5691..6065
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_523_4
unknown

Not on your lists

comp(6833..7000)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_523_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7844..8059)
DNA (216bp) protein (72aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacter
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ72_NIAKG
CRISPR-associated protein, Cas2 family
SCNpilot_solid_1_scaffold_523_6
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8317..8703)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Q2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ64964.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
SCNpilot_solid_1_scaffold_523_7
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8959..9963)
DNA (1005bp) protein (335aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphy
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI000373CBCE rbh
CRISPR-associated protein Cas1
SCNpilot_solid_1_scaffold_523_8
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

Not on your lists

comp(10231..10803)
DNA (573bp) protein (191aa)
CRISPR-associated protein Cas4 n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8GYI7_9BACT
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:EPT33619.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
cas4; CRISPR-associated protein Cas4
SCNpilot_solid_1_scaffold_523_9
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10779..11813)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GQB8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR94032.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
AAA ATPase
SCNpilot_solid_1_scaffold_523_10
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11783..11992)
DNA (210bp) protein (70aa)
AAA ATPase {ECO:0000313|EMBL:AEI52231.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594
SCNpilot_solid_1_scaffold_523_11
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12222..13430
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IXD8_CYCMS rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL26363.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (str
SCNpilot_solid_1_scaffold_523_12
unknown

Not on your lists

comp(13387..13650)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_523_13
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13767..14951)
DNA (1185bp) protein (395aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z9I1_BELBD rbh
putative ATPase (AAA+ superfamily)
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:AFL85899.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (st
SCNpilot_solid_1_scaffold_523_14
unknown

Not on your lists

15082..15183
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_523_15
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15266..17563)
DNA (2298bp) protein (766aa)
CRISPR-associated helicase Cas3 n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MR63_9BACE rbh
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:CDC01245.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source=
CRISPR-associated helicase Cas3
SCNpilot_solid_1_scaffold_523_16
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17556..18236)
DNA (681bp) protein (227aa)
CRISPR-associated protein Cas5 family n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MZ54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB48175.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
CRISPR-associated protein Cas5 family
SCNpilot_solid_1_scaffold_523_17
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18229..19260)
DNA (1032bp) protein (344aa)
CRISPR-associated autoregulator DevR family n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MNK8_9BACE rbh
CRISPR-associated protein cas7/cst2/devr, subtype I-b/tneap {ECO:0000313|EMBL:KKB48176.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroid
DevR family CRISPR-associated autoregulator
SCNpilot_solid_1_scaffold_523_18
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19273..21333)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6NU61_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB48177.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HG
hypothetical protein
SCNpilot_solid_1_scaffold_523_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(21799..22752)
DNA (954bp) protein (318aa)
HTH domain protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NK15_9BACE
transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
HTH domain protein
SCNpilot_solid_1_scaffold_523_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22766..23560)
DNA (795bp) protein (265aa)
CRISPR-associated protein Cas6 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRE8_NIAKG
CRISPR-associated protein Cas6
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:AEW01079.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
SCNpilot_solid_1_scaffold_523_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24066..26621
DNA (2556bp) protein (852aa)
LmbE family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQS1_NIAKG
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:AEV96805.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niaste
SCNpilot_solid_1_scaffold_523_22
unknown

Not on your lists

26599..26760
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_523_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26887..28611
DNA (1725bp) protein (575aa)
sodium:solute symporter n=1 Tax=Niabella aurantiaca RepID=UPI00037DF0AD rbh
sodium:solute symporter
Sodium:solute symporter {ECO:0000313|EMBL:AHF14587.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 1943
SCNpilot_solid_1_scaffold_523_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28759..29424
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFI3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO45632.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_523_25
unknown

Not on your lists

comp(29463..29612)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_523_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29676..30332
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFI3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98414.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_523_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30357..31028)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI52_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00669.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_523_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31146..32810)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI53_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00670.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_523_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32851..35889)
DNA (3039bp) protein (1013aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI54_NIAKG
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEW00671.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagacea
hypothetical protein
SCNpilot_solid_1_scaffold_523_30
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36078..36485
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000376BAB7
Contig34, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77458.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
hypothetical protein
Displaying 30 items

View Taxonomy