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SCNpilot_solid_1_scaffold_628

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_628_1
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2..223)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381A16A
Xanthan lyase {ECO:0000313|EMBL:EAZ83261.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
cytochrome C
SCNpilot_solid_1_scaffold_628_2
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

676..903
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YB75_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFF15768.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
hypothetical protein
SCNpilot_solid_1_scaffold_628_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1020..2225)
DNA (1206bp) protein (402aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:ACU61496.1}; EC=5.3.1.8 {ECO:0000313|EMBL:ACU61496.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Ch
Mannose-6-phosphate isomerase, class I n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ6_CHIPD rbh
mannose-6-phosphate isomerase
SCNpilot_solid_1_scaffold_628_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2244..2717)
DNA (474bp) protein (158aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT6_NIAKG
RNase HI
SCNpilot_solid_1_scaffold_628_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2777..3565)
DNA (789bp) protein (263aa)
isomerase n=1 Tax=Dyadobacter beijingensis RepID=UPI0003806A3A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO42976.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
phenazine biosynthesis protein PhzF family protein
SCNpilot_solid_1_scaffold_628_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3657..5285)
DNA (1629bp) protein (543aa)
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:AEV96821.1}; EC=6.4.1.4 {ECO:0000313|EMBL:AEV96821.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinoph
Methylcrotonoyl-CoA carboxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQT7_NIAKG
methylcrotonoyl-CoA carboxylase
SCNpilot_solid_1_scaffold_628_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5313..5693)
DNA (381bp) protein (127aa)
Stress responsive alpha-beta barrel domain-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EF40_RUNSL
stress responsive alpha-beta barrel domain-containing protein
Stress responsive alpha-beta barrel domain-containing protein {ECO:0000313|EMBL:AEI48917.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae;
SCNpilot_solid_1_scaffold_628_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5969..6286)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE70_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97261.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_628_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6633..8534
DNA (1902bp) protein (634aa)
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE73_NIAKG
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:KIC91755.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihu
DNA topoisomerase type IIA subunit B domain-containing protein
SCNpilot_solid_1_scaffold_628_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8639..9460
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE74_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC91756.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_628_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9502..12006
DNA (2505bp) protein (835aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEV97267.1}; EC=5.99.1.3 {ECO:0000313|EMBL:AEV97267.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chit
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE76_NIAKG rbh
DNA topoisomerase
SCNpilot_solid_1_scaffold_628_12
unknown

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12025..12114
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_628_13
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12229..13011
DNA (783bp) protein (261aa)
Sugar isomerase (SIS) n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J166_CYCMS rbh
sugar isomerase (SIS)
Sugar isomerase (SIS) {ECO:0000313|EMBL:AEL25815.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strai
SCNpilot_solid_1_scaffold_628_14
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13328..16312
DNA (2985bp) protein (995aa)
TonB-dependent receptor plug n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERZ0_EMTOG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AFK02443.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia ol
SCNpilot_solid_1_scaffold_628_15
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16325..18004
DNA (1680bp) protein (560aa)
RagB/SusD domain-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EE64_RUNSL rbh
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEI48880.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella
SCNpilot_solid_1_scaffold_628_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18366..18701
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKP4_9SPHI
bacillithiol system protein YtxJ
Bacillithiol system protein YtxJ {ECO:0000313|EMBL:AHF14620.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli
SCNpilot_solid_1_scaffold_628_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18852..20177)
DNA (1326bp) protein (442aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIZ6_NIAKG rbh
adenosylhomocysteinase
SCNpilot_solid_1_scaffold_628_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

20334..20846
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037BC515
transcriptional regulator, AsnC family Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
AsnC family transcriptional regulator
SCNpilot_solid_1_scaffold_628_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20981..21496
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGE8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97371.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
SCNpilot_solid_1_scaffold_628_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21639..22340
DNA (702bp) protein (234aa)
Outer membrane transport energization protein ExbB n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKZ1_NIAKG
Biopolymer transporter ExbB {ECO:0000313|EMBL:KIC89350.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumib
outer membrane transport energization protein ExbB
SCNpilot_solid_1_scaffold_628_21

Not on your lists

22656..23051
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D0174
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AIA18620.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
outer membrane transport energization protein ExbD
SCNpilot_solid_1_scaffold_628_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23044..23988)
DNA (945bp) protein (315aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY8_NIAKG rbh
protein-(glutamine-N5) methyltransferase
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:AEW00827.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
SCNpilot_solid_1_scaffold_628_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24349..25668
DNA (1320bp) protein (440aa)
transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI00036A2CCB rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACT91314.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobact
SCNpilot_solid_1_scaffold_628_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25859..26977
DNA (1119bp) protein (373aa)
Acriflavine resistance protein E n=1 Tax=uncultured bacterium A1Q1_fos_1093 RepID=L7VXG3_9BACT
Putative RND-type efflux pump membrane fusion protein {ECO:0000313|EMBL:GAO45721.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumiba
RND family efflux transporter MFP subunit
SCNpilot_solid_1_scaffold_628_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27045..30239
DNA (3195bp) protein (1065aa)
transporter n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EB6CF rbh
RND transporter {ECO:0000313|EMBL:KIC94594.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisi
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
SCNpilot_solid_1_scaffold_628_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30442..31311)
DNA (870bp) protein (290aa)
Beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCL6_NIAKG rbh
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEW02556.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella k
SCNpilot_solid_1_scaffold_628_27
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

32136..34664
DNA (2529bp) protein (843aa)
type III restriction endonuclease subunit R n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003781D11
Deoxyribonuclease {ECO:0000313|EMBL:KHE90687.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candid
type III restriction protein res subunit
SCNpilot_solid_1_scaffold_628_28
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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34664..35305
DNA (642bp) protein (214aa)
Putative uncharacterized protein id=1873806 bin=GWE2_Bacteroidetes_42_39 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
SCNpilot_solid_1_scaffold_628_29
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

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35311..38004
DNA (2694bp) protein (898aa)
Restriction modification system DNA specificity domain id=4047602 bin=GWB1_CP_36_13 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 rbh
restriction modification system DNA specificity domain Tax=GWB1_Spirochaetes_36_13_curated
restriction modification system DNA specificity domain protein
Displaying 29 items

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