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SCNpilot_solid_1_scaffold_7507

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_7507_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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405..1451
DNA (1047bp) protein (349aa)
Sodium/calcium exchanger membrane region n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSL8_PEDHD rbh
sodium/calcium exchanger membrane protein
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:ACU05581.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
SCNpilot_solid_1_scaffold_7507_2
unknown

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comp(1468..1599)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_7507_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1715..2080
DNA (366bp) protein (122aa)
Cupin 2 barrel domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y819_9SPHI
Cupin 2 barrel domain-containing protein {ECO:0000313|EMBL:EHQ31041.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" so
cupin domain-containing protein
SCNpilot_solid_1_scaffold_7507_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2110..2736
DNA (627bp) protein (209aa)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EDA7_RUNSL
signal transduction histidine kinase, nitrogen specific, NtrB
Signal transduction histidine kinase, nitrogen specific, NtrB {ECO:0000313|EMBL:AEI47784.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="
SCNpilot_solid_1_scaffold_7507_5
unknown

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2765..2887
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_7507_6
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2910..3233
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YQE9_CAPCC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEN44673.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canim
SCNpilot_solid_1_scaffold_7507_7
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3412..3849)
DNA (438bp) protein (146aa)
hypothetical protein AtheD1_10361 id=3901594 bin=GWF2_Bacteroidetes_35_48 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
peptidase M23 Tax=GWF2_Bacteroidetes_35_48_curated
hypothetical protein
SCNpilot_solid_1_scaffold_7507_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4047..4586
DNA (540bp) protein (180aa)
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIT5_NIAKG
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEV96429.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niaste
SCNpilot_solid_1_scaffold_7507_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4658..5074)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIT3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96427.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
Displaying 9 items

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