ggKbase home page

SCNpilot_solid_1_scaffold_1005

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1005_1
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..1904
DNA (1902bp) protein (634aa)
Peptidase domain protein id=4368784 bin=GWF2_Bacteroidetes_35_48 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
peptidase domain-containing protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_solid_1_scaffold_1005_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2094..2474
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR54_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98968.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_1005_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2596..4737
DNA (2142bp) protein (714aa)
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR53_NIAKG rbh
Translation elongation factor 2 (EF-2/EF-G) {ECO:0000313|EMBL:AEV98967.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="N
translation elongation factor 2 (EF-2/EF-G)
SCNpilot_solid_1_scaffold_1005_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4770..7070)
DNA (2301bp) protein (767aa)
Cell wall hydrolase/autolysin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TE94_NIAKG
cell wall hydrolase/autolysin Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
cell wall hydrolase/autolysin
SCNpilot_solid_1_scaffold_1005_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7130..7522)
DNA (393bp) protein (131aa)
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI000363669F
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF14665.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19
SCNpilot_solid_1_scaffold_1005_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7665..8351
DNA (687bp) protein (229aa)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEV98979.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEV98979.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinop
Phosphonate-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR65_NIAKG
phosphonate-transporting ATPase
SCNpilot_solid_1_scaffold_1005_7
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8403..9485)
DNA (1083bp) protein (361aa)
Peptidase M19 renal dipeptidase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ERM1_EMTOG rbh
peptidase M19 renal dipeptidase
Peptidase M19 renal dipeptidase {ECO:0000313|EMBL:AFK02324.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (str
SCNpilot_solid_1_scaffold_1005_8
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9504..10517)
DNA (1014bp) protein (338aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00036534C8 rbh
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AKD54238.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_solid_1_scaffold_1005_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10540..11286)
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6B5_DYAFD rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT94255.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen
SCNpilot_solid_1_scaffold_1005_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11386..12492)
DNA (1107bp) protein (369aa)
Linoleoyl-CoA desaturase {ECO:0000313|EMBL:AEW02788.1}; EC=1.14.19.3 {ECO:0000313|EMBL:AEW02788.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagace
Linoleoyl-CoA desaturase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THE2_NIAKG
Linoleoyl-CoA desaturase
SCNpilot_solid_1_scaffold_1005_11
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12632..13615)
DNA (984bp) protein (328aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZEA9_9BACT rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EAY31417.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATC
hopanoid-associated sugar epimerase
SCNpilot_solid_1_scaffold_1005_12
unknown

Not on your lists

13698..14453
DNA (756bp) protein (252aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1005_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14463..19364)
DNA (4902bp) protein (1634aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQR5_NIAKG rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC94169.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_1005_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19497..19703
DNA (207bp) protein (69aa)
Peptidase T2 asparaginase 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PT33_CHIPD
peptidase T2 asparaginase 2
Peptidase T2 asparaginase 2 {ECO:0000313|EMBL:ACU59072.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" sou
SCNpilot_solid_1_scaffold_1005_15
unknown

Not on your lists

comp(19758..20399)
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1005_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20538..21077)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQR8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96802.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_1005_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21240..21809
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEB7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98327.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
SCNpilot_solid_1_scaffold_1005_18
unknown

Not on your lists

21955..22140
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 18 items

View Taxonomy