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SCNpilot_solid_1_scaffold_1065

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1065_1
unknown

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1..360
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1065_2
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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317..622
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F88E7
Excinuclease ABC subunit C {ECO:0000313|EMBL:KIA99468.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
excinuclease ABC subunit C
SCNpilot_solid_1_scaffold_1065_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

598..1179
DNA (582bp) protein (194aa)
colanic acid biosynthesis acetyltransferase WcaF; K03818 putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000378F990
colanic acid biosynthesis acetyltransferase WcaF
SCNpilot_solid_1_scaffold_1065_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1199..1945
DNA (747bp) protein (249aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD3_NIAKG rbh
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEW03006.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
SCNpilot_solid_1_scaffold_1065_5
unknown

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comp(2486..2599)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1065_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2620..3735
DNA (1116bp) protein (372aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1349421 species="Bacte
GDP-mannose 4,6-dehydratase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD4_NIAKG rbh
GDP-mannose 4,6-dehydratase
SCNpilot_solid_1_scaffold_1065_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4439..5368
DNA (930bp) protein (310aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD5_NIAKG rbh
GDP-L-fucose synthase rbh
SCNpilot_solid_1_scaffold_1065_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5770..6510
DNA (741bp) protein (247aa)
PHP domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD6_NIAKG
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:AEW03009.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strai
SCNpilot_solid_1_scaffold_1065_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6874..7248)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E0_NIAKG
50S ribosomal protein L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella ko
SCNpilot_solid_1_scaffold_1065_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(7520..8047)
DNA (528bp) protein (176aa)
50S ribosomal protein L10 n=1 Tax=Segetibacter koreensis RepID=UPI00037A84F5
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|RuleBase:RU003636, ECO:0000256|SAAS:SAAS00104918}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastel
SCNpilot_solid_1_scaffold_1065_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8076..8768)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E2_NIAKG rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
50S ribosomal protein L1
SCNpilot_solid_1_scaffold_1065_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(8798..9241)
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7E3_NIAKG
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niast
SCNpilot_solid_1_scaffold_1065_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9815..10972)
DNA (1158bp) protein (386aa)
Putative thiol-disulfide oxidoreductase {ECO:0000313|EMBL:GAO43008.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source
Thiol-disulfide oxidoreductase resA id=3992795 bin=GWF2_Bacteroidetes_40_14 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
alkyl hydroperoxide reductase
SCNpilot_solid_1_scaffold_1065_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11420..12985
DNA (1566bp) protein (522aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphin
ribonuclease n=1 Tax=Segetibacter koreensis RepID=UPI0003634146 rbh
2,3 cyclic-nucleotide 2-phosphodiesterase
SCNpilot_solid_1_scaffold_1065_15
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


13141..13497
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT1_NIAKG
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flav
50S ribosomal protein L19
SCNpilot_solid_1_scaffold_1065_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13664..13912
DNA (249bp) protein (83aa)
Sec-independent translocation protein mttA/Hcf106 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJT2_NIAKG
sec-independent translocation protein mttA/Hcf106
Sec-independent translocation protein mttA/Hcf106 {ECO:0000313|EMBL:AEW01830.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sou
SCNpilot_solid_1_scaffold_1065_17
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(14029..15081)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000381A6E5 rbh
Glucose-fructose oxidoreductase {ECO:0000313|EMBL:ELR73428.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis
oxidoreductase domain-containing protein
SCNpilot_solid_1_scaffold_1065_18
unknown

Not on your lists

15473..15925
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1065_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16191..17957)
DNA (1767bp) protein (589aa)
Xenobiotic-transporting ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP05_NIAKG rbh
Antibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC92399.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;"
xenobiotic-transporting ATPase
SCNpilot_solid_1_scaffold_1065_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18132..19139)
DNA (1008bp) protein (336aa)
von Willebrand factor type A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL65_NIAKG
Aerotolerance regulator BatA {ECO:0000313|EMBL:KIC96137.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
von Willebrand factor type A
SCNpilot_solid_1_scaffold_1065_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19142..20170)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CFD11
Uncharacterized protein {ECO:0000313|EMBL:GAO41714.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_solid_1_scaffold_1065_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20192..21115)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL67_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01908.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
Displaying 22 items

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