ggKbase home page

SCNpilot_solid_1_scaffold_1622

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1622_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(263..610)
DNA (348bp) protein (116aa)
GIY-YIG_SF superfamily protein id=2779681 bin=GWF2_Bacteroidetes_41_31 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
endonuclease containing a URI domain Tax=GWF2_Bacteroidetes_41_31_curated
endonuclease containing a URI domain
SCNpilot_solid_1_scaffold_1622_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1291..4368
DNA (3078bp) protein (1026aa)
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4Z6_SPHS2 rbh
TonB-denpendent receptor {ECO:0000313|EMBL:GAL85064.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;
TonB-dependent receptor plug
SCNpilot_solid_1_scaffold_1622_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4390..5931
DNA (1542bp) protein (514aa)
carbohydrate-binding protein SusD n=1 Tax=Dyadobacter beijingensis RepID=UPI0003809D5B rbh
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:GAL85063.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxoco
RagB/SusD domain-containing protein
SCNpilot_solid_1_scaffold_1622_4
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5960..8242
DNA (2283bp) protein (761aa)
Sulfatase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W1K9_DYAFD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAL85062.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
sulfatase
SCNpilot_solid_1_scaffold_1622_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8353..9633
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B9F27 rbh
Galactonate dehydratase {ECO:0000313|EMBL:GAD47780.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
mandelate racemase/muconate lactonizing protein
SCNpilot_solid_1_scaffold_1622_6
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9810..11000
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMJ8_SOLCM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFD08989.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source=
SCNpilot_solid_1_scaffold_1622_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11225..13381)
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A2162 rbh
Collagen-binding protein {ECO:0000313|EMBL:KIC90514.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibact
TonB-dependent receptor plug
SCNpilot_solid_1_scaffold_1622_8
unknown

Not on your lists

13708..14016
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1622_9
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14118..14531)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH86_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_solid_1_scaffold_1622_10
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14799..15566)
DNA (768bp) protein (256aa)
KAP P-loop domain protein n=2 Tax=Myroides RepID=H1Z750_MYROD rbh
KAP P-loop domain protein {ECO:0000313|EMBL:EHQ41487.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2
KAP P-loop domain-containing protein
Displaying 10 items

View Taxonomy