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SCNpilot_solid_1_scaffold_1915

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1915_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(157..885)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360CCD9 rbh
Esterase {ECO:0000313|EMBL:KIC92723.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
esterase
SCNpilot_solid_1_scaffold_1915_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(959..1702)
DNA (744bp) protein (248aa)
ATPase involved in chromosome partitioning n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KX64_SOLCM
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:KIC91075.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Fl
chromosome partitioning ATPase
SCNpilot_solid_1_scaffold_1915_3
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1965..2276
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GY11_9SPHI
Toxin RelE {ECO:0000313|EMBL:KFF23190.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.
uncharacterized protein conserved in bacteria
SCNpilot_solid_1_scaffold_1915_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2260..2619
DNA (360bp) protein (120aa)
transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B7A2DF
Putative transcription regulator with HTH domain {ECO:0000313|EMBL:EHQ25076.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibact
XRE family transcriptional regulator
SCNpilot_solid_1_scaffold_1915_5
unknown

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2790..3065
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1915_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3071..3319
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003734906
Uncharacterized protein {ECO:0000313|EMBL:KIA86472.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
SCNpilot_solid_1_scaffold_1915_7
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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3537..4307
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362690D
restriction endonuclease
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_solid_1_scaffold_1915_8
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4324..5211
DNA (888bp) protein (296aa)
Modification methylase n=1 Tax=Clostridium thermocellum BC1 RepID=U4MZU8_CLOTM rbh
Contig93, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75603.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
modification methylase
SCNpilot_solid_1_scaffold_1915_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5291..7336)
DNA (2046bp) protein (682aa)
UvrABC system protein B n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH3_NIAKG rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
Excinuclease ABC subunit B
SCNpilot_solid_1_scaffold_1915_10
unknown

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comp(7343..7864)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1915_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7929..8429)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362755A
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEI46699.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain
SCNpilot_solid_1_scaffold_1915_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8441..8893)
DNA (453bp) protein (151aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH2_NIAKG
Methylglyoxal synthase
SCNpilot_solid_1_scaffold_1915_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9011..10012)
DNA (1002bp) protein (334aa)
Protein RecA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH0_NIAKG rbh
protein recA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=700598 species="Bacteria; Bacteroid
SCNpilot_solid_1_scaffold_1915_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10733..12292)
DNA (1560bp) protein (520aa)
Protein involved in gliding motility GldJ n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG7_NIAKG rbh
Gliding motility protein {ECO:0000313|EMBL:KIC95375.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibact
gliding motility protein GldJ
SCNpilot_solid_1_scaffold_1915_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12739..13896
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003699011
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03216.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Ni
Displaying 15 items

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