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SCNpilot_solid_1_scaffold_261_19

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(13149..14024)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 291.0
  • Bit_score: 477
  • Evalue 1.40e-131
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavi similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 289.0
  • Bit_score: 483
  • Evalue 2.60e-133
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 291.0
  • Bit_score: 477
  • Evalue 3.80e-132

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGTATGCGTCAACTCAAAATCACGAAGTCCATTACCAATCGTGAGTCTCAGAGTCTTGAAAAGTACCTGCAGGAGATCGGTAGGGTAGAACTGATTGGTCCTGAAGAAGAAGTTAAGCTGGCGGGGCTTATTAAGCAAGGCGATCAGAAAGCGCTGGACAGGCTTACCAAAGCCAATTTGCGTTTTGTGGTTTCTGTAGCCAAGCAATACCAGAACCAGGGCTTGTCACTTCCCGATCTCATTAACGAAGGTAATTTAGGTTTAATCAAAGCTGCGCAGCGCTTCGATGAAACAAGAGGGTTTAAATTTATATCGTATGCGGTGTGGTGGATCCGGCAGAGTATTTTACAGGCATTGGCCGAGCAGTCGCGTATTGTTCGTTTGCCACTTAATAAGGTGGGGCTTACCAACCGGATCAATAAGGCTTTTCAGCAATTAGAACAGGAATATGAACGGGAACCTTCCGCCGAAGAACTGGCAGATTTGCTGGATATAGATTCCGATGAAATTTCGGCTACGCTTGGAGTAGCTGCAAGACATGTAAGTATGGATACCCCATTGTCGGATGGCGAGGACAGTACACTGGTTGACGTTATGGAGAATCCCAATGCCGACAGTGTTGATCTGAAAATAATCCATCACGAATCATTGAAGAAGGAAATTGAAAGATCATTGCACACCTTAACCGACCGGCAGCAGGATGTGATACGATTCTTTTTTGGCATAGGCTTCGATAACCCTATGAGCCTTGAAGACATAGGTGAAAGATTCAATCTAACCCGCGAACGGGTTCGCCAGATAAAAGATAAGGCAATCACCAAGCTCAGAACAACCTCCAGATGCAAACTTTTAAAAACTTATTTGGGCACATAA
PROTEIN sequence
Length: 292
MSMRQLKITKSITNRESQSLEKYLQEIGRVELIGPEEEVKLAGLIKQGDQKALDRLTKANLRFVVSVAKQYQNQGLSLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNKVGLTNRINKAFQQLEQEYEREPSAEELADLLDIDSDEISATLGVAARHVSMDTPLSDGEDSTLVDVMENPNADSVDLKIIHHESLKKEIERSLHTLTDRQQDVIRFFFGIGFDNPMSLEDIGERFNLTRERVRQIKDKAITKLRTTSRCKLLKTYLGT*