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SCNpilot_solid_1_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_261_1
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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277..579
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z514_FLABF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB70738.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bra
SCNpilot_solid_1_scaffold_261_2
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

648..1484
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z098_FLABF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCB70737.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bra
SCNpilot_solid_1_scaffold_261_3
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1465..2232
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z513_FLABF rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCB70736.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bra
SCNpilot_solid_1_scaffold_261_4
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2261..2722
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003658AB0
DoxX family protein; K15977 putative oxidoreductase Tax=GWF2_Bacteroidetes_41_31_curated
DoxX family protein
SCNpilot_solid_1_scaffold_261_5
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2826..3332
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XTP3_FLAIG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
SCNpilot_solid_1_scaffold_261_6
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3320..4060
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0P7_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:KJS06904.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
SCNpilot_solid_1_scaffold_261_7
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

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4053..5003
DNA (951bp) protein (317aa)
hypothetical protein FbacS_07410 id=4316668 bin=GWA2_Bacteroidetes_40_14 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_solid_1_scaffold_261_8
Lacinutrix sp. 5H-3-7-4, Lacinutrix, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5030..5674
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GHL0_LACS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH01103.1}; TaxID=983544 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lacinutrix.;" source="Lacinutrix sp. (strain
SCNpilot_solid_1_scaffold_261_9
unknown

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5838..6029
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_261_10
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6022..6681
DNA (660bp) protein (220aa)
Heavy metal-associated domain protein n=2 Tax=Bacteroidetes RepID=C2G242_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAE65867.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
copper chaperone
SCNpilot_solid_1_scaffold_261_11
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6723..8171
DNA (1449bp) protein (483aa)
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flav
Mercuric reductase n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z810_BELBD
mercuric reductase
SCNpilot_solid_1_scaffold_261_12
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8244..8441
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QN76_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39265.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
SCNpilot_solid_1_scaffold_261_13
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8495..9040
DNA (546bp) protein (182aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0N7_EMTOG
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFK05490.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" sour
SCNpilot_solid_1_scaffold_261_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9158..10240
DNA (1083bp) protein (361aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJS1_NIAKG
Dihydroorotate dehydrogenase
SCNpilot_solid_1_scaffold_261_15
unknown

Not on your lists

comp(10214..10366)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_261_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10530..11051)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
16S rRNA processing protein RimM
SCNpilot_solid_1_scaffold_261_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(11143..11574)
DNA (432bp) protein (144aa)
30S ribosomal protein S16 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK9_NIAKG
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
SCNpilot_solid_1_scaffold_261_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(11677..12996)
DNA (1320bp) protein (440aa)
Signal recognition particle protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK8_NIAKG rbh
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingoba
SCNpilot_solid_1_scaffold_261_19
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13149..14024)
DNA (876bp) protein (292aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK7_NIAKG
RNA polymerase sigma factor rpoD {ECO:0000313|EMBL:KIC95338.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavi
RpoD subfamily RNA polymerase sigma-70 subunit
SCNpilot_solid_1_scaffold_261_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14307..14687
DNA (381bp) protein (127aa)
Activator of HSP90 ATPase 1 family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQK6_NIAKG
activator of HSP90 ATPase 1 family protein
Uncharacterized protein {ECO:0000313|EMBL:GAO41538.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
SCNpilot_solid_1_scaffold_261_21
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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15027..16583
DNA (1557bp) protein (519aa)
Putative permease id=4125632 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
putative permease Tax=GWF2_Bacteroidetes_41_31_curated
permease YjgP/YjgQ family protein
SCNpilot_solid_1_scaffold_261_22
unknown

Not on your lists

16562..16657
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_261_23
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16711..17238
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Marinobacter lipolyticus RepID=UPI000382B225
Uncharacterized protein {ECO:0000313|EMBL:AFP29464.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp.
SCNpilot_solid_1_scaffold_261_24
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17368..18327)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AT55_MARSH
Uncharacterized protein {ECO:0000313|EMBL:AHM58726.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
SCNpilot_solid_1_scaffold_261_25
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18330..20399)
DNA (2070bp) protein (690aa)
Blue (Type 1) copper domain protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBP6_SPILD
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:AHM63038.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.
blue (type 1) copper domain-containing protein
SCNpilot_solid_1_scaffold_261_26
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20412..21863)
DNA (1452bp) protein (484aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXZ2_PEDHD
membrane protein
Membrane protein {ECO:0000313|EMBL:AIM38184.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium
SCNpilot_solid_1_scaffold_261_27
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21884..23440)
DNA (1557bp) protein (519aa)
SusD family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G3C7_9SPHI rbh
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KEO75559.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
carbohydrate-binding protein SusD
SCNpilot_solid_1_scaffold_261_28
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23458..26511)
DNA (3054bp) protein (1018aa)
TonB-dependent receptor plug n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PIS0_MURRD rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEM71815.1}; Flags: Precursor;; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="
TonB-dependent receptor plug
SCNpilot_solid_1_scaffold_261_29
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(26558..27403)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CRG0_9BACT
xylose isomerase domain-containing protein Tax=RBG_16_Chloroflexi_47_49_curated
sugar phosphate isomerase
SCNpilot_solid_1_scaffold_261_30
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27406..28647)
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11QE7_CYTH3
Transport protein {ECO:0000313|EMBL:GAL84675.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
transport protein
Displaying items 1-30 of 54 in total

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