ggKbase home page

SCNpilot_solid_1_scaffold_1808_5

Organism: SCNPILOT_SOLID_1_Sphingobacteriales_41_19

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 2662..3840

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:KIC95908.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 397.0
  • Bit_score: 302
  • Evalue 6.60e-79
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 424.0
  • Bit_score: 277
  • Evalue 4.60e-72
FecR protein id=2885643 bin=GWF2_Bacteroidetes_40_14 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 401.0
  • Bit_score: 277
  • Evalue 1.60e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCCGAACAAATTAAAGGAATTATTTAAGCGCTTCCTTGCAAATAGTATTTCGCCTGAAGAAAAAAAGGAGCTAATGGGAATGGCACTGGAGACCGGCTTGCAGGATGAGTTGAAGCAGGTTATCAAAGATGCCTGGCAGCAAACGGGGGAAGATGAAGATATTACGGACGCCAAAGCGGAGGAGCTGATGCAAAAAATTTTTGCGGAGAGCTCCGAAAACAAAACCAAGCTGACACCTATCAGCAAAAGAACCGGATGGCGAAGCATTGCAGCGGCAGCAGCAATTGTTACCGCATTAGGAACAGCAACATATTACGCGGCCATTCATAAGTCGGGCAACCCTCCTGAAATCGTAAAAACCACTGCACTTTCTTTAGATGTAAAACCACCCCAAACCAACCGGGCAATCATTGTAATGGCCGGCGGTAAAACCGTGTACTTAGACAGCACCGTCAATGGAATACTGGCGGTGCAGGACAATATGCAACTGATCAGGCTGGATGACGGCCAGATAGCCTACCGTGGTTCAGCCAAAGAATTGATCTATAACACGCTAACTAACCCACGGGGCAGTAAAGTCATCAATATGACTTTGTCCGATGGCAGCCAGGTTTGGCTGAACGCAGGTTCATCCGTCACCTATCCGGTTACGTTTATCGGCGATGAAAGAAAAGTATCCGTTACGGGTGAGGCCTATTTTGAGGTGGCACATGATATTGCAAAGCCATTCACCGTAAGCAAAGGAGACCTGCAGGTGCAGGTATTGGGTACCCGGTTCAATATAAACGCATATGATGATGAGGGCAATGCCAGGATAACATTGCTGCAGGGCTCCGTAAAAGTAAAGAATGGTAAAAAAGAAGATATACTGCAACCCGGCCAGCAGGCACAGATTGCTGCAGGGATAAAAATAATCAGCGATATAGATGTAGAACAGGCAATAGCGTGGAAAAACGGCTTGTTTGTTTTTGACAGGGCGGATATCAGGGATGTGATGCGGCAACTGGCACGCTGGTATGATCTGGACGTATATTACACAGACGATATCCCAAAAGGGAAATTTAAGGGAGAAATTTCAAAAGACCTGACCTTATCGCAGGTATTGAACGGGCTAACCACAGCGAGAATTCATTTTACAATGGAAGGCGGCAATAAGATCACCATTTTGCCGGAATAG
PROTEIN sequence
Length: 393
MPNKLKELFKRFLANSISPEEKKELMGMALETGLQDELKQVIKDAWQQTGEDEDITDAKAEELMQKIFAESSENKTKLTPISKRTGWRSIAAAAAIVTALGTATYYAAIHKSGNPPEIVKTTALSLDVKPPQTNRAIIVMAGGKTVYLDSTVNGILAVQDNMQLIRLDDGQIAYRGSAKELIYNTLTNPRGSKVINMTLSDGSQVWLNAGSSVTYPVTFIGDERKVSVTGEAYFEVAHDIAKPFTVSKGDLQVQVLGTRFNINAYDDEGNARITLLQGSVKVKNGKKEDILQPGQQAQIAAGIKIISDIDVEQAIAWKNGLFVFDRADIRDVMRQLARWYDLDVYYTDDIPKGKFKGEISKDLTLSQVLNGLTTARIHFTMEGGNKITILPE*