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SCNpilot_solid_1_scaffold_1

Search features with annotation key words

Displaying items 391-420 of 493 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1_390
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(396596..396967)
DNA (372bp) protein (124aa)
probable uroporphyrin-III c-methyltransferase (EC:2.1.1.107)
Probable uroporphyrin-III c-methyltransferase {ECO:0000313|EMBL:CDM24524.1}; EC=2.1.1.107 {ECO:0000313|EMBL:CDM24524.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F1716E
SCNpilot_solid_1_scaffold_1_391
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(396971..398374)
DNA (1404bp) protein (468aa)
Fumarate hydratase class II (EC:4.2.1.2) rbh
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743, ECO:0000313|EMBL:CDM24525.1}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743, ECO:000031
Fumarate hydratase class II n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTC2_PUSST rbh
SCNpilot_solid_1_scaffold_1_392
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(398409..399446)
DNA (1038bp) protein (346aa)
D-erythrose-4-phosphate dehydrogenase (EC:1.2.1.72) rbh
D-erythrose-4-phosphate dehydrogenase {ECO:0000313|EMBL:CDM24526.1}; EC=1.2.1.72 {ECO:0000313|EMBL:CDM24526.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F49420 rbh
SCNpilot_solid_1_scaffold_1_393
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(399512..400486)
DNA (975bp) protein (325aa)
Hydroxypyruvate reductase (EC:1.1.1.81) rbh
Hydroxypyruvate reductase {ECO:0000313|EMBL:CDM24527.1}; EC=1.1.1.81 {ECO:0000313|EMBL:CDM24527.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
Glycerate dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GE33_ALIDK
SCNpilot_solid_1_scaffold_1_394
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

400615..401226
DNA (612bp) protein (204aa)
Glutathione S-transferase (EC:2.5.1.18) rbh
Glutathione S-transferase {ECO:0000313|EMBL:CDM24528.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CDM24528.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
Glutathione S-transferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTC8_PUSST
SCNpilot_solid_1_scaffold_1_395
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(401281..401988)
DNA (708bp) protein (236aa)
High-affinity branched-chain amino acid transport, ATP-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTC9_PUSST rbh
Branched-chain amino acid transport ATP-binding protein LivF rbh
Branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CDM24529.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_1_396
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(401985..402749)
DNA (765bp) protein (255aa)
Leucine/isoleucine/valine transporter ATP-binding subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTD0_PUSST rbh
Branched-chain amino acid transport ATP-binding protein LivG rbh
Branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:CDM24530.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castel
SCNpilot_solid_1_scaffold_1_397
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(402746..403972)
DNA (1227bp) protein (409aa)
Leucine/isoleucine/valine transporter permease subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTD1_PUSST rbh
Branched-chain amino acid transport system permease protein LivM rbh
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM24531.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
SCNpilot_solid_1_scaffold_1_398
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(403972..404901)
DNA (930bp) protein (310aa)
High-affinity branched-chain amino acid transport system, permease protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTD2_PUSST rbh
High-affinity branched-chain amino acid transport system permease protein LivH rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM24532.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_1_399
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(404987..406105)
DNA (1119bp) protein (373aa)
Leu/Ile/val-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTD3_PUSST rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:CDM24533.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
SCNpilot_solid_1_scaffold_1_400
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(406333..407166)
DNA (834bp) protein (278aa)
Pyrroline-5-carboxylate reductase (EC:1.5.1.2) rbh
Pyrroline-5-carboxylate reductase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L0I3_BORA1 rbh
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
SCNpilot_solid_1_scaffold_1_401
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

407400..408710
DNA (1311bp) protein (437aa)
Glycerol-3-phosphate-binding periplasmic protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTD5_PUSST rbh
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein rbh
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:CDM24535.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
SCNpilot_solid_1_scaffold_1_402
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

408714..409595
DNA (882bp) protein (294aa)
sn-glycerol-3-phosphate transport system, permease protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTD6_PUSST rbh
Glycerol-3-phosphate ABC transporter, permease protein UgpA rbh
Glycerol-3-phosphate ABC transporter, permease protein UgpA {ECO:0000313|EMBL:CDM24536.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castell
SCNpilot_solid_1_scaffold_1_403
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

409610..410452
DNA (843bp) protein (281aa)
sn-glycerol-3-phosphate transport system permease protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTD7_PUSST rbh
Glycerol-3-phosphate ABC transporter, permease protein UgpE rbh
Glycerol-3-phosphate ABC transporter, permease protein UgpE {ECO:0000313|EMBL:CDM24537.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castell
SCNpilot_solid_1_scaffold_1_404
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

410466..411542
DNA (1077bp) protein (359aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000256|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000256|HAMAP-Rule:MF_01727};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteoba
sn-Glycerol-3-phosphate transport ATP-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IM29_BORPD rbh
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC rbh
SCNpilot_solid_1_scaffold_1_405
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411610..412731)
DNA (1122bp) protein (374aa)
Leu/Ile/val-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTE0_PUSST rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:CDM24539.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
SCNpilot_solid_1_scaffold_1_406
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412865..413389)
DNA (525bp) protein (175aa)
Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC:1.16.3.1) rbh
Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase {ECO:0000313|EMBL:CDM24540.1}; EC=1.16.3.1 {ECO:0000313|EMBL:CDM24540.1};; TaxID=1437824 species="Ba
Putative DNA-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTE1_PUSST
SCNpilot_solid_1_scaffold_1_407
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(413486..414439)
DNA (954bp) protein (318aa)
LysR family transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTE2_PUSST rbh
Hydrogen peroxide-inducible genes activator rbh
Hydrogen peroxide-inducible genes activator {ECO:0000313|EMBL:CDM24541.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc
SCNpilot_solid_1_scaffold_1_408
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(414463..416538)
DNA (2076bp) protein (692aa)
ATP-dependent DNA helicase RecG n=1 Tax=Bordetella sp. FB-8 RepID=UPI000374009A rbh
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDM24542.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
ATP-dependent DNA helicase RecG rbh
SCNpilot_solid_1_scaffold_1_409
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(416553..416939)
DNA (387bp) protein (129aa)
Putative translation-inhibition endoribonuclease n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L0E4_BORA1
RidA
RidA {ECO:0000313|EMBL:CDM24543.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCNpilot_solid_1_scaffold_1_410
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(417010..417903)
DNA (894bp) protein (298aa)
Ferredoxin--NADP(+) reductase (EC:1.18.1.2) rbh
Ferredoxin--NADP(+) reductase {ECO:0000313|EMBL:CDM24544.1}; EC=1.18.1.2 {ECO:0000313|EMBL:CDM24544.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
ferredoxin--NADP reductase n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036258C4 rbh
SCNpilot_solid_1_scaffold_1_411
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

418056..419099
DNA (1044bp) protein (348aa)
Extracellular solute-binding protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B8T2_ALCFA rbh
Ferric iron ABC transporter, iron-binding protein rbh
Ferric iron ABC transporter, iron-binding protein {ECO:0000313|EMBL:CDM24545.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_1_412
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

419109..420758
DNA (1650bp) protein (550aa)
iron ABC transporter permease n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00037D57D6 rbh
Ferric iron ABC transporter, permease protein rbh
Ferric iron ABC transporter, permease protein {ECO:0000313|EMBL:CDM24546.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sou
SCNpilot_solid_1_scaffold_1_413
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

420771..421550
DNA (780bp) protein (260aa)
ABC transporter n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EC1BA7 rbh
Ferric iron ABC transporter, ATP-binding protein rbh
Ferric iron ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDM24547.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_1_414
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(421555..423078)
DNA (1524bp) protein (508aa)
Nitrogen regulation protein NR(I) n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MX30_BORBM rbh
Nitrogen regulation protein NR(I) rbh
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:CDM24548.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castell
SCNpilot_solid_1_scaffold_1_415
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(423075..424028)
DNA (954bp) protein (318aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
Nitrogen regulation protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTF0_PUSST rbh
Nitrogen regulation protein NR(II) rbh
SCNpilot_solid_1_scaffold_1_416
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(424041..425453)
DNA (1413bp) protein (471aa)
Glutamine synthetase type I (EC:6.3.1.2) rbh
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356, ECO:0000313|EMBL:CDM24550.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
Glutamine synthetase n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HHW7_ACHXA rbh
SCNpilot_solid_1_scaffold_1_417
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425669..426889)
DNA (1221bp) protein (407aa)
Coproporphyrinogen III oxidase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTF2_PUSST
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24552.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_418
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(426900..427517)
DNA (618bp) protein (206aa)
Nucleoside 5-triphosphatase RdgB (EC:3.6.1.15) rbh
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030667EF
SCNpilot_solid_1_scaffold_1_419
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(427514..428266)
DNA (753bp) protein (251aa)
Ribonuclease PH (EC:2.7.7.56) rbh
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ILQ1_BORPD rbh
Displaying items 391-420 of 493 in total

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