ggKbase home page

SCNpilot_solid_1_scaffold_1

Search features with annotation key words

Displaying items 361-390 of 493 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1_360
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(362304..363113)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00037EF0C9 rbh
putative lipoprotein rbh
Putative lipoprotein {ECO:0000313|EMBL:CDM24474.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defra
SCNpilot_solid_1_scaffold_1_361
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

363245..364039
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QQW6_9BURK
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24476.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_362
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(364113..365090)
DNA (978bp) protein (326aa)
phosphotransacetylase (EC:2.3.1.8)
Phosphotransacetylase n=1 Tax=Castellaniella defragrans RepID=Q84H43_CASDE rbh
Phosphotransacetylase {ECO:0000313|EMBL:AAN08490.1}; TaxID=75697 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defrag
SCNpilot_solid_1_scaffold_1_363
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(365113..366921)
DNA (1809bp) protein (603aa)
Sulfoacetaldehyde acetyltransferase {ECO:0000303|PubMed:12358600}; EC=2.3.3.15 {ECO:0000269|PubMed:12358600};; TaxID=75697 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
Sulfoacetaldehyde acetyltransferase n=1 Tax=Castellaniella defragrans RepID=XSC_CASDE rbh
sulfoacetaldehyde acetyltransferase
SCNpilot_solid_1_scaffold_1_364
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

367232..367624
DNA (393bp) protein (131aa)
SnoaL-like polyketide cyclase family protein 3 n=1 Tax=Achromobacter piechaudii HLE RepID=J4J8L0_9BURK
SnoaL-like polyketide cyclase family protein 3 {ECO:0000313|EMBL:EJO32614.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" sou
polyketide cyclase
SCNpilot_solid_1_scaffold_1_365
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(367688..369181)
DNA (1494bp) protein (498aa)
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC:2.6.1.1)
GntR family regulatory protein 31 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T8M4_ALCXX rbh
GntR family regulatory protein 31 {ECO:0000313|EMBL:EGP43336.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromob
SCNpilot_solid_1_scaffold_1_366
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(369199..370029)
DNA (831bp) protein (277aa)
Taurine transporter permease TauC n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F6H2_9BURK
Taurine transporter permease TauC {ECO:0000313|EMBL:EHK66144.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromoba
permease component of taurine ABC transporter
SCNpilot_solid_1_scaffold_1_367
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(370064..370891)
DNA (828bp) protein (276aa)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
ABC transporter related n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TF78_BURPP rbh
ABC transporter family protein
SCNpilot_solid_1_scaffold_1_368
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(371007..372119)
DNA (1113bp) protein (371aa)
Taurine ABC transporter, periplasmic binding protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XCC0_9BURK rbh
Taurine ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:EFF75543.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;
tauA; taurine ABC transporter periplasmic binding protein
SCNpilot_solid_1_scaffold_1_369
Aeromonas diversa, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(372323..373093)
DNA (771bp) protein (257aa)
Short-chain alcohol dehydrogenase family protein n=1 Tax=Aeromonas diversa 2478-85 RepID=N9VGY6_9GAMM rbh
Short-chain alcohol dehydrogenase family protein {ECO:0000313|EMBL:ENY70646.1}; TaxID=1268237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source
Short-chain alcohol dehydrogenase family
SCNpilot_solid_1_scaffold_1_370
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(373224..374489)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQE0_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24477.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_371
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

374755..375051
DNA (297bp) protein (99aa)
Acylphosphate phosphohydrolase (EC:3.6.1.7)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553, ECO:0000313|EMBL:CDM24480.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
Acylphosphatase n=10 Tax=Burkholderia cepacia complex RepID=ACYP_BURCA
SCNpilot_solid_1_scaffold_1_372
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

375125..375553
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSQ0_PUSST
CopG protein
CopG protein {ECO:0000313|EMBL:CDM24481.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65
SCNpilot_solid_1_scaffold_1_373
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(375599..376876)
DNA (1278bp) protein (426aa)
Flagellar motor protein n=2 Tax=Alcaligenes RepID=M5IW74_9BURK
Flagellar motor rotation protein MotB rbh
Flagellar motor rotation protein MotB {ECO:0000313|EMBL:CDM24482.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_solid_1_scaffold_1_374
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(376873..377727)
DNA (855bp) protein (285aa)
Flagellar motor protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0B8V7_ALCFA rbh
Flagellar motor rotation protein MotA rbh
Flagellar motor rotation protein MotA {ECO:0000313|EMBL:CDM24483.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_solid_1_scaffold_1_375
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(377941..378999)
DNA (1059bp) protein (353aa)
alcohol dehydrogenase n=1 Tax=Pseudomonas caeni RepID=UPI0003B34A59 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AKH20385.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
alcohol dehydrogenase GroES
SCNpilot_solid_1_scaffold_1_376
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(379147..381708)
DNA (2562bp) protein (854aa)
ATPase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289AEF4 rbh
ATPase rbh
ATPase {ECO:0000313|EMBL:AJP71309.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_solid_1_scaffold_1_377
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(381778..384657)
DNA (2880bp) protein (960aa)
Ribonucleotide reductase of class II {ECO:0000313|EMBL:CDM24519.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CDM24519.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Al
Ribonucleotide reductase of class II (EC:1.17.4.1) rbh
Ribonucleoside-diphosphate reductase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSW4_PUSST rbh
SCNpilot_solid_1_scaffold_1_378
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(384817..385752)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E34D47 rbh
Putative transcriptional regulator rbh
Putative transcriptional regulator {ECO:0000313|EMBL:CDM24508.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castel
SCNpilot_solid_1_scaffold_1_379
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(385801..386976)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000379FEC3
ABC transporter substrate-binding protein rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDM24509.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source=
SCNpilot_solid_1_scaffold_1_380
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(387000..388892)
DNA (1893bp) protein (631aa)
phenol 2-monooxygenase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003771078
2-polyprenyl-6-methoxyphenol hydroxylase rbh
2-polyprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:CDM24510.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="
SCNpilot_solid_1_scaffold_1_381
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(389134..389772)
DNA (639bp) protein (213aa)
Probable glutathione S-transferase (EC:2.5.1.18)
Probable glutathione S-transferase {ECO:0000313|EMBL:CDM23346.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CDM23346.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
glutathione S-transferase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002F7EA39
SCNpilot_solid_1_scaffold_1_382
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(389820..390368)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000380DE07
SAM-dependent methlyltransferase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_solid_1_scaffold_1_383
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

390569..391705
DNA (1137bp) protein (379aa)
Quinolinate synthetase (EC:2.5.1.72) rbh
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027, ECO:0000313|EMBL:CDM24516.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
Quinolinate synthase A n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CVM0_9BURK rbh
SCNpilot_solid_1_scaffold_1_384
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

391702..392580
DNA (879bp) protein (293aa)
Quinolinate phosphoribosyltransferase [decarboxylating] (EC:2.4.2.19) rbh
Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000313|EMBL:CDM24517.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CDM24517.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria;
Nicotinate-nucleotide pyrophosphorylase (Carboxylating) n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZJ2_JANMA rbh
SCNpilot_solid_1_scaffold_1_385
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(392645..394279)
DNA (1635bp) protein (545aa)
L-aspartate oxidase (EC:1.4.3.16) rbh
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CDM24518.1}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049, ECO:0000313|EMBL:CDM24518.1};; TaxID=1437824 species="Bacteria; Proteobact
L-aspartate oxidase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003171A0F
SCNpilot_solid_1_scaffold_1_386
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(394424..394756)
DNA (333bp) protein (111aa)
Cytochrome c, class I n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46W69_CUPPJ
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:CDM24520.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defr
SCNpilot_solid_1_scaffold_1_387
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

394972..395460
DNA (489bp) protein (163aa)
Putative thioredoxin n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSV9_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24521.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_388
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(395345..396205)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D26BE6 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24522.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_389
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(396202..396531)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037CB412
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24523.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
Displaying items 361-390 of 493 in total

View Taxonomy