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SCNpilot_solid_1_scaffold_1

Search features with annotation key words

Displaying items 331-360 of 493 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1_330
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(331946..332392)
DNA (447bp) protein (149aa)
Transcriptional regulator n=4 Tax=Ochrobactrum RepID=C4WFD1_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EEQ96228.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermediu
transcriptional regulator protein
SCNpilot_solid_1_scaffold_1_331
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

332444..333457
DNA (1014bp) protein (338aa)
Putative zinc-dependent alcohol dehydrogenase protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IIW7_AZOC5 rbh
Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase ( NADPH:quinone reductase) rbh
Bifunctional protein: zinc-containing alcohol dehydrogenase quinone oxidoreductase ( NADPH:quinone reductase) {ECO:0000313|EMBL:CDM25004.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteo
SCNpilot_solid_1_scaffold_1_332
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

333686..334840
DNA (1155bp) protein (385aa)
Butyryl-CoA dehydrogenase (EC:1.3.8.1) rbh
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CDM25303.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CDM25303.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
Acyl-CoA dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS43_PUSST rbh
SCNpilot_solid_1_scaffold_1_333
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

334837..336006
DNA (1170bp) protein (390aa)
3-hydroxyisobutyryl-CoA hydrolase (EC:3.1.2.4) rbh
3-hydroxyisobutyryl-CoA hydrolase {ECO:0000313|EMBL:CDM24461.1}; EC=3.1.2.4 {ECO:0000313|EMBL:CDM24461.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcali
Enoyl-CoA hydratase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS44_PUSST rbh
SCNpilot_solid_1_scaffold_1_334
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

336049..336942
DNA (894bp) protein (298aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31) rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714, ECO:0000313|EMBL:CDM24462.1}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714, ECO:0000313|
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS45_PUSST rbh
SCNpilot_solid_1_scaffold_1_335
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(336965..337927)
DNA (963bp) protein (321aa)
Putative aminomethyl transferase n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L109_BORA1
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress rbh
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress {ECO:0000313|EMBL:CDM24463.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_1_336
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(337945..338673)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003032A37
Permease {ECO:0000313|EMBL:KIA92039.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_solid_1_scaffold_1_337
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(338700..339464)
DNA (765bp) protein (255aa)
Putative transcriptional regulator, IclR family n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RB60_CUPTR
transcriptional regulator IclR family
Putative transcriptional regulator, IclR family {ECO:0000313|EMBL:CAQ72135.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" sou
SCNpilot_solid_1_scaffold_1_338
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

339631..341265
DNA (1635bp) protein (545aa)
betA2; choline dehydrogenase (EC:1.1.99.1) rbh
Choline dehydrogenase, a flavoprotein {ECO:0000313|EMBL:CAQ72136.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CAQ72136.1};; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Bu
choline dehydrogenase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000373A16B rbh
SCNpilot_solid_1_scaffold_1_339
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

341287..341844
DNA (558bp) protein (186aa)
mannitol transporter (EC:5.3.1.1)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003611BF5
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
SCNpilot_solid_1_scaffold_1_340
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

341841..343163
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000373B871 rbh
DctM family transporter Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
mannitol transporter
SCNpilot_solid_1_scaffold_1_341
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

343238..344359
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036EA075 rbh
ABC transporter binding protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
hypothetical protein
SCNpilot_solid_1_scaffold_1_342
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(344369..345151)
DNA (783bp) protein (261aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
Thiazole synthase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0F9_RAMTT rbh
thiG; thiazole biosynthesis protein thiG
SCNpilot_solid_1_scaffold_1_343
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(345155..345379)
DNA (225bp) protein (75aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5I5_LEPCP
thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:ACB34697.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strai
SCNpilot_solid_1_scaffold_1_344
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(345376..346443)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037E8E74 rbh
Thiamine biosynthesis protein thio {ECO:0000313|EMBL:ETF00857.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis
glycine oxidase ThiO
SCNpilot_solid_1_scaffold_1_345
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

346516..347355
DNA (840bp) protein (280aa)
Transcriptional regulator, IclR family n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J2Z9_PSEUL rbh
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:BAK76444.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source
SCNpilot_solid_1_scaffold_1_346
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

347352..348341
DNA (990bp) protein (330aa)
Aerobic cobaltochelatase subunit CobS n=1 Tax=Pandoraea sp. RB-44 RepID=V5UGT2_9BURK
cobalamin biosynthesis protein CobS
Cobalamin biosynthesis protein CobS {ECO:0000313|EMBL:AJE98796.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea
SCNpilot_solid_1_scaffold_1_347
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

348328..350085
DNA (1758bp) protein (586aa)
cobaltochelatase (EC:6.6.1.2)
Cobaltochelatase {ECO:0000313|EMBL:ADU38574.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ADU38574.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovor
Cobaltochelatase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAA2_VARPE rbh
SCNpilot_solid_1_scaffold_1_348
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

350189..350581
DNA (393bp) protein (131aa)
Transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXY1_9BURK
Transcriptional regulator {ECO:0000313|EMBL:ETF04218.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;
putative taurine dehydrogenase small subunit
SCNpilot_solid_1_scaffold_1_349
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

350618..352048
DNA (1431bp) protein (477aa)
FAD dependent oxidoreductase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F6H4_9BURK rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHK66146.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter
FAD dependent oxidoreductase
SCNpilot_solid_1_scaffold_1_350
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

352261..353703
DNA (1443bp) protein (481aa)
amino acid permease n=1 Tax=Bacillus oceanisediminis RepID=UPI0003194B3A rbh
Uncharacterized protein {ECO:0000313|EMBL:EFV76795.1}; TaxID=665959 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 2_A_57_CT2.;"
amino acid permease rbh
SCNpilot_solid_1_scaffold_1_351
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

353767..354777
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IXN5_9BURK
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24465.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_352
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

354782..355435
DNA (654bp) protein (218aa)
Thymidylate kinase (EC:2.7.4.9) rbh
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:CDM24466.1}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:CDM24466.1};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00
Thymidylate kinase n=2 Tax=Bordetella holmesii RepID=M5NQE4_9BORD
SCNpilot_solid_1_scaffold_1_353
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

355432..356475
DNA (1044bp) protein (348aa)
DNA polymerase III delta prime subunit (EC:2.7.7.7) rbh
DNA polymerase III delta prime subunit {ECO:0000313|EMBL:CDM24467.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM24467.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; A
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FE3CF rbh
SCNpilot_solid_1_scaffold_1_354
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

356491..357267
DNA (777bp) protein (259aa)
Hydrolase, TatD family protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HTP3_ACHXA rbh
Putative deoxyribonuclease YcfH rbh
Putative deoxyribonuclease YcfH {ECO:0000313|EMBL:CDM24468.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
SCNpilot_solid_1_scaffold_1_355
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

357353..358294
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DFDBA9
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24469.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_356
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(358335..359408)
DNA (1074bp) protein (358aa)
Sulfate and thiosulfate import ATP-binding protein CysA (EC:3.6.3.25) rbh
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701, ECO:0000313|EMBL:CDM24470.1};; Sulfate-transporting ATPase {ECO:000
sulfate ABC transporter ATP-binding protein n=1 Tax=Massilia niastensis RepID=UPI000374926A rbh
SCNpilot_solid_1_scaffold_1_357
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(359405..360292)
DNA (888bp) protein (296aa)
Thiosulfate transport protein ABC superfamily, membrane component n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R2K1_CUPTR
Sulfate transport system permease protein CysW rbh
Sulfate transport system permease protein CysW {ECO:0000313|EMBL:CDM24471.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_solid_1_scaffold_1_358
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(360303..361154)
DNA (852bp) protein (284aa)
ABC-type sulfate transport system, permease component protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IQQ7_HERSS rbh
Sulfate transport system permease protein CysT rbh
Sulfate transport system permease protein CysT {ECO:0000313|EMBL:CDM24472.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_solid_1_scaffold_1_359
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(361159..362163)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037D6C10 rbh
Sulfate and thiosulfate binding protein CysP rbh
Sulfate and thiosulfate binding protein CysP {ECO:0000313|EMBL:CDM24473.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sour
Displaying items 331-360 of 493 in total

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