ggKbase home page

SCNpilot_solid_1_scaffold_1

Search features with annotation key words

Displaying items 301-330 of 493 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1_300
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

301769..303175
DNA (1407bp) protein (469aa)
Dihydrofolate synthase / Folylpolyglutamate synthase (EC:6.3.2.12 6.3.2.17) rbh
Dihydrofolate synthase / Folylpolyglutamate synthase {ECO:0000313|EMBL:CDM24430.1}; EC=6.3.2.12 {ECO:0000313|EMBL:CDM24430.1};; EC=6.3.2.17 {ECO:0000313|EMBL:CDM24430.1};; TaxID=1437824 species="Bacte
FolC bifunctional protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS09_PUSST rbh
SCNpilot_solid_1_scaffold_1_301
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

303220..304086
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS10_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC19560.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_1_302
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

304083..304571
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EDFCD9
Colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:CDM24431.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_1_303
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

304586..306091
DNA (1506bp) protein (502aa)
Amidophosphoribosyltransferase (EC:2.4.2.14) rbh
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS12_PUSST rbh
SCNpilot_solid_1_scaffold_1_304
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(306154..306636)
DNA (483bp) protein (161aa)
Disulfide bond formation protein B n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IKX6_BORPD
Periplasmic thiol:disulfide oxidoreductase DsbB
Periplasmic thiol:disulfide oxidoreductase DsbB {ECO:0000313|EMBL:CDM24433.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" s
SCNpilot_solid_1_scaffold_1_305
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(306633..309266)
DNA (2634bp) protein (878aa)
uridylyltransferase (EC:2.7.7.59) rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS14_PUSST rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII
SCNpilot_solid_1_scaffold_1_306
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(309263..310078)
DNA (816bp) protein (272aa)
Methionine aminopeptidase (EC:3.4.11.18) rbh
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CDM24435.1}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {EC
Methionine aminopeptidase n=2 Tax=Alcaligenes RepID=M5J0J7_9BURK rbh
SCNpilot_solid_1_scaffold_1_307
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


310267..311019
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS16_PUSST rbh
SSU ribosomal protein S2p rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_1_308
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

311119..311994
DNA (876bp) protein (292aa)
Elongation factor Ts n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS17_PUSST rbh
Translation elongation factor Ts rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacter
SCNpilot_solid_1_scaffold_1_309
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

312097..312813
DNA (717bp) protein (239aa)
Uridine monophosphate kinase (EC:2.7.4.22) rbh
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
Uridylate kinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS18_PUSST rbh
SCNpilot_solid_1_scaffold_1_310
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

312825..313385
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS19_PUSST rbh
Ribosome recycling factor rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1437824 species="Bacteria;
SCNpilot_solid_1_scaffold_1_311
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

313414..314175
DNA (762bp) protein (254aa)
Undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligena
UDP diphosphate synthase n=1 Tax=Pusillimonas noertemannii RepID=UPI0002EB889C rbh
SCNpilot_solid_1_scaffold_1_312
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

314187..315026
DNA (840bp) protein (280aa)
Phosphatidate cytidylyltransferase (EC:2.7.7.41) rbh
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938, ECO:0000313|EMBL:CDM24441.1}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938, ECO:0000313|EMBL:CDM24441.1};; TaxID=1437824 species="Bacte
Phosphatidate cytidylyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS21_PUSST rbh
SCNpilot_solid_1_scaffold_1_313
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

315030..316244
DNA (1215bp) protein (405aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267) rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FE58_9BURK rbh
SCNpilot_solid_1_scaffold_1_314
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

316251..317585
DNA (1335bp) protein (445aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
Putative membrane protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MIL6_BORPB rbh
Membrane-associated zinc metalloprotease rbh
SCNpilot_solid_1_scaffold_1_315
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

317655..320018
DNA (2364bp) protein (788aa)
Outer membrane protein assembly factor BamA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS24_PUSST rbh
Outer membrane protein assembly factor YaeT precursor rbh
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
SCNpilot_solid_1_scaffold_1_316
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320086..320637
DNA (552bp) protein (184aa)
Putative outer membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS25_PUSST
Outer membrane protein H precursor rbh
Outer membrane protein H {ECO:0000313|EMBL:CDM24445.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella d
SCNpilot_solid_1_scaffold_1_317
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

320644..321783
DNA (1140bp) protein (380aa)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.191) rbh
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00036669EE rbh
SCNpilot_solid_1_scaffold_1_318
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

321783..322235
DNA (453bp) protein (151aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase, FabZ form (EC:4.2.1.59)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS27_PUSST
SCNpilot_solid_1_scaffold_1_319
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

322235..323032
DNA (798bp) protein (266aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129) rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS28_PUSST rbh
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
SCNpilot_solid_1_scaffold_1_320
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

323091..324320
DNA (1230bp) protein (410aa)
Lipid-A-disaccharide synthase (EC:2.4.1.182) rbh
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1437824 species="B
Lipid-A-disaccharide synthase n=2 Tax=Bordetella holmesii RepID=M5NQF6_9BORD rbh
SCNpilot_solid_1_scaffold_1_321
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

324304..324924
DNA (621bp) protein (207aa)
Ribonuclease HII (EC:3.1.26.4) rbh
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS30_PUSST
SCNpilot_solid_1_scaffold_1_322
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

324921..325721
DNA (801bp) protein (267aa)
RNA methyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS31_PUSST
rRNA methylases rbh
rRNA methylases {ECO:0000313|EMBL:CDM24451.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans
SCNpilot_solid_1_scaffold_1_323
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(325780..326613)
DNA (834bp) protein (278aa)
Putative phosphoenolpyruvate synthase regulatory protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS32_PUSST rbh
hypothetical protein rbh
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule
SCNpilot_solid_1_scaffold_1_324
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

326830..329208
DNA (2379bp) protein (793aa)
Phosphoenolpyruvate synthase (EC:2.7.9.2) rbh
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854, ECO:0000313|EMBL:CDM24453.1}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854, ECO:0000313|E
Phosphoenolpyruvate synthase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS33_PUSST rbh
SCNpilot_solid_1_scaffold_1_325
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

329326..330009
DNA (684bp) protein (228aa)
Methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63) rbh
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:CDM24454.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CDM24454.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003164892
SCNpilot_solid_1_scaffold_1_326
Sodalis praecaptivus, Sodalis, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330068..330565)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003771C9F
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AHF79325.1}; TaxID=1239307 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Sodalis.;" source="Sod
SCNpilot_solid_1_scaffold_1_327
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(330662..331126)
DNA (465bp) protein (155aa)
SsrA-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS40_PUSST
tmRNA-binding protein SmpB rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellanie
SCNpilot_solid_1_scaffold_1_328
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331184..331618
DNA (435bp) protein (145aa)
Polyketide cyclase/dehydrase and lipid transport family protein 2 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FE77_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24458.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_329
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

331620..331913
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4J8M2_9BURK
hypothetical protein
UPF0125 protein BN940_09996 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
Displaying items 301-330 of 493 in total

View Taxonomy