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SCNpilot_solid_1_scaffold_1

Search features with annotation key words

Displaying items 271-300 of 493 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1_270
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265158..266507)
DNA (1350bp) protein (450aa)
Sugar transporter family protein 14 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SWI9_ALCXX rbh
Metabolite transport transmembrane protein {ECO:0000313|EMBL:KGD59711.1}; TaxID=1177181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" sour
major facilitator superfamily permease
SCNpilot_solid_1_scaffold_1_271
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266720..267628
DNA (909bp) protein (303aa)
Cytochrome o ubiquinol oxidase subunit II n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1A9_9SPHN
cytochrome o ubiquinol oxidase subunit II
Cytochrome o ubiquinol oxidase subunit II {ECO:0000313|EMBL:AGH49546.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sourc
SCNpilot_solid_1_scaffold_1_272
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267631..269622
DNA (1992bp) protein (664aa)
cytochrome O ubiquinol oxidase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000308D902 rbh
Cytochrome o ubiquinol oxidase subunit I {ECO:0000313|EMBL:AJC21328.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pando
cytochrome o ubiquinol oxidase subunit I
SCNpilot_solid_1_scaffold_1_273
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

269615..270265
DNA (651bp) protein (217aa)
cytochrome O ubiquinol oxidase n=1 Tax=Janthinobacterium lividum RepID=UPI00028A410E rbh
Cytochrome o ubiquinol oxidase subunit III {ECO:0000313|EMBL:KHA75707.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" sou
cytochrome ubiquinol oxidase subunit III
SCNpilot_solid_1_scaffold_1_274
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270262..270648
DNA (387bp) protein (129aa)
Cytochrome C oxidase subunit III n=1 Tax=Advenella kashmirensis W13003 RepID=V8QNA9_9BURK
cyoD; cytochrome o ubiquinol oxidase protein CyoD
Cytochrome o ubiquinol oxidase protein CyoD {ECO:0000313|EMBL:AHG63234.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mim
SCNpilot_solid_1_scaffold_1_275
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270722..271492
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E0A170
Uncharacterized protein {ECO:0000313|EMBL:KDP83703.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion
SCNpilot_solid_1_scaffold_1_276
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271489..272802
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UYH6_VARPE
integral membrane sensor signal transduction histidine kinase
SCNpilot_solid_1_scaffold_1_277
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272786..273349
DNA (564bp) protein (188aa)
Two component transcriptional regulator, Fis family n=2 Tax=Acidovorax RepID=A1W9J7_ACISJ
two component Fis family transcriptional regulator
Two component transcriptional regulator, Fis family {ECO:0000313|EMBL:ABM42922.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
SCNpilot_solid_1_scaffold_1_278
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

273498..274466
DNA (969bp) protein (323aa)
Exported protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRI1_PUSST rbh
ABC transporter substrate-binding protein rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDM24407.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source=
SCNpilot_solid_1_scaffold_1_279
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274557..275444
DNA (888bp) protein (296aa)
ABC transporter, permease protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRI2_PUSST rbh
ABC transporter permease protein rbh
ABC transporter permease protein {ECO:0000313|EMBL:CDM24408.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
SCNpilot_solid_1_scaffold_1_280
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

275446..276240
DNA (795bp) protein (265aa)
ABC transporter-related protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TRW9_ACIAC
ABC transporter ATP-binding protein rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDM24409.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_solid_1_scaffold_1_281
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(276287..276865)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHJ5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL44287.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
SCNpilot_solid_1_scaffold_1_282
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

277122..277670
DNA (549bp) protein (183aa)
Transcriptional repressor for acridine efflux pump acrab n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G512_RALS8
Hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24410.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_283
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

277842..279095
DNA (1254bp) protein (418aa)
Multidrug efflux system inner membrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRZ4_PUSST rbh
RND efflux system, membrane fusion protein CmeA rbh
RND efflux system, membrane fusion protein CmeA {ECO:0000313|EMBL:CDM24411.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" s
SCNpilot_solid_1_scaffold_1_284
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

279140..282304
DNA (3165bp) protein (1055aa)
acriflavine resistance protein B n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E8E3CF rbh
RND efflux system, inner membrane transporter CmeB {ECO:0000313|EMBL:CDM24412.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;
RND efflux system, inner membrane transporter CmeB rbh
SCNpilot_solid_1_scaffold_1_285
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282301..283734
DNA (1434bp) protein (478aa)
Outer membrane efflux protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRZ6_PUSST rbh
RND efflux system, outer membrane lipoprotein CmeC rbh
RND efflux system, outer membrane lipoprotein CmeC {ECO:0000313|EMBL:CDM24413.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;
SCNpilot_solid_1_scaffold_1_286
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

283734..284459
DNA (726bp) protein (242aa)
Pyridoxine 5'-phosphate synthase (EC:2.6.99.2) rbh
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279,
Pyridoxine 5'-phosphate synthase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0JN46_ALCFA rbh
SCNpilot_solid_1_scaffold_1_287
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284541..285122
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRZ8_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24415.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_288
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(285148..285597)
DNA (450bp) protein (150aa)
Cu(I)-responsive transcriptional regulator n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HI27_ACHXA
Cu(I)-responsive transcriptional regulator
Cu(I)-responsive transcriptional regulator {ECO:0000313|EMBL:CDM24416.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_1_289
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(285597..287873)
DNA (2277bp) protein (759aa)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase {ECO:0000313|EMBL:CDM24417.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CDM24417.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CDM24417.1
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase (EC:3.6.3.4 3.6.3.3) rbh
Heavy-metal transporting P-type ATPase n=2 Tax=Bordetella holmesii RepID=M5P3H2_9BORD
SCNpilot_solid_1_scaffold_1_290
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

287997..288197
DNA (201bp) protein (67aa)
Putative exported protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9INX9_BORPD
putative heavy metal transport protein
Putative heavy metal transport protein {ECO:0000313|EMBL:CDM24419.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_1_291
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

288208..289599
DNA (1392bp) protein (464aa)
Dihydrolipoamide dehydrogenase (EC:1.8.1.4) rbh
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:CDM24420.1}; EC=1.8.1.4 {ECO:0000313|EMBL:CDM24420.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F06FBE rbh
SCNpilot_solid_1_scaffold_1_292
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(289635..290237)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E4EF46
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone rbh
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone {ECO:0000313|EMBL:CDM24421.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
SCNpilot_solid_1_scaffold_1_293
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290241..292325)
DNA (2085bp) protein (695aa)
Oligopeptidase A (EC:3.4.24.70) rbh
Oligopeptidase A {ECO:0000313|EMBL:CDM24422.1}; EC=3.4.24.70 {ECO:0000313|EMBL:CDM24422.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
Oligopeptidase A n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS01_PUSST rbh
SCNpilot_solid_1_scaffold_1_294
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292357..293211)
DNA (855bp) protein (285aa)
Methylenetetrahydrofolate dehydrogenase (NADP+) / Methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9) rbh
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase n=1 Tax=Pusillimonas noertemannii RepID=UPI00031DA4C7 rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_1_295
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293208..293837)
DNA (630bp) protein (210aa)
Two-component response regulator n=2 Tax=Alcaligenes RepID=M5IV04_9BURK rbh
Nitrogen regulation protein NR(I) rbh
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:CDM24424.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castell
SCNpilot_solid_1_scaffold_1_296
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293834..295588)
DNA (1755bp) protein (585aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
Two-component sensor kinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS04_PUSST rbh
tw-component sensor kinase rbh
SCNpilot_solid_1_scaffold_1_297
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

295826..298537
DNA (2712bp) protein (904aa)
Pyruvate dehydrogenase E1 component (EC:1.2.4.1) rbh
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156, ECO:0000313|EMBL:CDM24426.1}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156, ECO:0000313|EMBL:CDM24426.1};; TaxID=1437824 species="Bacte
Pyruvate dehydrogenase E1 component n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS06_PUSST rbh
SCNpilot_solid_1_scaffold_1_298
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298552..299895
DNA (1344bp) protein (448aa)
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC:2.3.1.12) rbh
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137, ECO:0000313|EMBL:CDM24428.1};; TaxID=1437824 species="Bacteri
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GS07_PUSST rbh
SCNpilot_solid_1_scaffold_1_299
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299906..301696
DNA (1791bp) protein (597aa)
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC:1.8.1.4) rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CDM24429.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacter
dihydrolipoamide dehydrogenase n=1 Tax=Bordetella sp. FB-8 RepID=UPI000373229A rbh
Displaying items 271-300 of 493 in total

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