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SCNpilot_solid_1_scaffold_1

Search features with annotation key words

Displaying items 31-60 of 493 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1_31
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38206..38883)
DNA (678bp) protein (226aa)
Tricarboxylate transport transcriptional regulator TctD n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XLX6_ALCXX rbh
Tricarboxylate transport transcriptional regulator TctD rbh
Tricarboxylate transport transcriptional regulator TctD {ECO:0000313|EMBL:AHC45104.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobact
SCNpilot_solid_1_scaffold_1_32
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38973..40433
DNA (1461bp) protein (487aa)
Inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205) rbh
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQL8_PUSST rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
SCNpilot_solid_1_scaffold_1_33
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40506..41654
DNA (1149bp) protein (383aa)
N-acetyl-L,L-diaminopimelate deacetylase (EC:3.5.1.47) rbh
N-acetyl-L,L-diaminopimelate deacetylase {ECO:0000313|EMBL:CDM24660.1}; EC=3.5.1.47 {ECO:0000313|EMBL:CDM24660.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037C69D8
SCNpilot_solid_1_scaffold_1_34
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41609..42337)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQL9_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC19385.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_1_35
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42334..43620)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQM0_PUSST rbh
Transporter, MFS superfamily rbh
Transporter, MFS superfamily {ECO:0000313|EMBL:CDM24659.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniel
SCNpilot_solid_1_scaffold_1_36
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43705..44901)
DNA (1197bp) protein (399aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQU1_POLNA rbh
extracellular ligand-binding receptor
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABM38019.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
SCNpilot_solid_1_scaffold_1_37
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44931..45629)
DNA (699bp) protein (233aa)
ABC transporter-like protein id=12553235 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
ABC transporter-like protein
SCNpilot_solid_1_scaffold_1_38
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45626..46351)
DNA (726bp) protein (242aa)
ABC transporter-like protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
ABC transporter-like protein id=12553234 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ABC transporter-like protein
SCNpilot_solid_1_scaffold_1_39
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46361..47362)
DNA (1002bp) protein (334aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQT8_POLNA rbh
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ABM38016.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_solid_1_scaffold_1_40
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47359..48210)
DNA (852bp) protein (284aa)
ABC transporter permease n=1 Tax=Curvibacter lanceolatus RepID=UPI0003731B84 rbh
inner-membrane translocator
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ABM38015.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Pol
SCNpilot_solid_1_scaffold_1_41
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48235..49017)
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQT6_POLNA rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABM38014.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polar
SCNpilot_solid_1_scaffold_1_42
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49014..49361)
DNA (348bp) protein (116aa)
NIPSNAP family containing protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQT5_POLNA
NIPSNAP family protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
NIPSNAP family protein
SCNpilot_solid_1_scaffold_1_43
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49401..51113)
DNA (1713bp) protein (571aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B8X7_9BURK rbh
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:EED99749.1}; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiac
putative succinate dehydrogenase
SCNpilot_solid_1_scaffold_1_44
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51122..51937)
DNA (816bp) protein (272aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQT3_POLNA rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABM38011.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polar
SCNpilot_solid_1_scaffold_1_45
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52136..53032
DNA (897bp) protein (299aa)
Transcriptional regulator, AraC family n=1 Tax=Azoarcus sp. KH32C RepID=H0Q5X0_9RHOO
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KDB07088.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bu
transcriptional regulator, AraC family
SCNpilot_solid_1_scaffold_1_46
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53097..54698
DNA (1602bp) protein (534aa)
GMP synthase [glutamine-hydrolyzing] (EC:6.3.5.2) rbh
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQM1_PUSST rbh
SCNpilot_solid_1_scaffold_1_47
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55050..56252
DNA (1203bp) protein (401aa)
Putative integrase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQM2_PUSST rbh
integrase rbh
Putative integrase {ECO:0000313|EMBL:AEC19388.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain
SCNpilot_solid_1_scaffold_1_48
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56282..56569)
DNA (288bp) protein (96aa)
Phage transcriptional regulator, AlpA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQM3_PUSST
phage transcriptional regulator, AlpA
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:AEC19389.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusil
SCNpilot_solid_1_scaffold_1_49
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57957..58625
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N8_ALIDK
Uncharacterized protein {ECO:0000313|EMBL:AEB84538.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source=
membrane protein
SCNpilot_solid_1_scaffold_1_50
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58927..61047)
DNA (2121bp) protein (707aa)
Lead, cadmium, zinc and mercury transporting ATPase, Copper-translocating P-type ATPase {ECO:0000313|EMBL:CDM24496.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CDM24496.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CDM24496.
Lead, cadmium, zinc and mercury transporting ATPase, Copper-translocating P-type ATPase (EC:3.6.3.4 3.6.3.3) rbh
Copper-translocating P-type ATPase 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HKH7_ACHXA
SCNpilot_solid_1_scaffold_1_51
unknown

Not on your lists

61610..61927
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1_52
unknown

Not on your lists

comp(61790..62149)
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1_53
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62177..63010)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT64_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99220.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_1_54
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63071..64153)
DNA (1083bp) protein (361aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Ca
Heavy metal sensor signal transduction histidine kinase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSP4_PUSST
Osmosensitive K+ channel histidine kinase KdpD
SCNpilot_solid_1_scaffold_1_55
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64550..65233)
DNA (684bp) protein (228aa)
Two component heavy metal response transcriptional regulator, winged helix family protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSP5_PUSST
DNA-binding heavy metal response regulator
DNA-binding heavy metal response regulator {ECO:0000313|EMBL:CDM24494.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source
SCNpilot_solid_1_scaffold_1_56
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65432..67303
DNA (1872bp) protein (624aa)
Copper-resistance protein, CopA family protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSP6_PUSST rbh
Multicopper oxidase rbh
Multicopper oxidase {ECO:0000313|EMBL:CDM24493.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defrag
SCNpilot_solid_1_scaffold_1_57
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67300..68316
DNA (1017bp) protein (339aa)
Copper resistance B n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSP7_PUSST rbh
Copper resistance protein CopB {ECO:0000313|EMBL:EZQ19365.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
copper resistance B
SCNpilot_solid_1_scaffold_1_58
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68389..68889
DNA (501bp) protein (167aa)
Blue (Type1) copper domain-containing protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GN59_PUSST
Copper tolerance protein rbh
Copper tolerance protein {ECO:0000313|EMBL:CDM24491.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella d
SCNpilot_solid_1_scaffold_1_59
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69229..69438
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IEY2_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24490.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_60
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69715..69903
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. SJ98 RepID=K8RNB8_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM24489.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
Displaying items 31-60 of 493 in total

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