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SCNpilot_solid_1_scaffold_1

Search features with annotation key words

Displaying items 91-120 of 493 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_1_91
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97497..98213)
DNA (717bp) protein (239aa)
Type IV secretion system protein VirB5 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMM0_PUSST rbh
type IV secretion system protein VirB5 rbh
Type IV secretion system protein VirB5 {ECO:0000313|EMBL:AEC20314.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusi
SCNpilot_solid_1_scaffold_1_92
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98294..98680)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2E3_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44050.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
SCNpilot_solid_1_scaffold_1_93
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98677..98880)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:CEI36824.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri
SCNpilot_solid_1_scaffold_1_94
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98871..99413)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2E0_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44049.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
SCNpilot_solid_1_scaffold_1_95
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99461..101890)
DNA (2430bp) protein (810aa)
Type IV secretion system protein VirB4 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2D7_BORPD
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) rbh
ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) {ECO:0000313|EMBL:CDM25183.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteob
SCNpilot_solid_1_scaffold_1_96
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101887..102291)
DNA (405bp) protein (135aa)
Type IV secretion system protein VirB3 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GML7_PUSST
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3)
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) {ECO:0000313|EMBL:CDM25182.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
SCNpilot_solid_1_scaffold_1_97
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102295..102615)
DNA (321bp) protein (107aa)
Conjugal transfer protein TrwL n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2D1_BORPD
trwL; conjugal transfer protein TrwL
Conjugal transfer protein TrwL {ECO:0000313|EMBL:CAP44046.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petr
SCNpilot_solid_1_scaffold_1_98
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102713..103348)
DNA (636bp) protein (212aa)
Type IV secretion system protein VirB1 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GML5_PUSST
Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1)
Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1) {ECO:0000313|EMBL:CDM25180.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkh
SCNpilot_solid_1_scaffold_1_99
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103361..104038)
DNA (678bp) protein (226aa)
Conjugal transfer protein TrbM n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2C6_BORPD
IncP-type conjugative transfer protein TrbM
IncP-type conjugative transfer protein TrbM {ECO:0000313|EMBL:CDM25179.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc
SCNpilot_solid_1_scaffold_1_100
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104105..104395)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I0E3_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25178.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_1_101
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(104536..105963)
DNA (1428bp) protein (476aa)
Transcriptional regulator n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QC74_9CYAN rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AGY56456.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCNpilot_solid_1_scaffold_1_102
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106575..106895
DNA (321bp) protein (107aa)
Transcriptional regulator, ArsR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ43_NITHX
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:KFC72198.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. L
SCNpilot_solid_1_scaffold_1_103
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106892..107323
DNA (432bp) protein (144aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UI23_SINMW
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABR63303.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; S
SCNpilot_solid_1_scaffold_1_104
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107404..107796
DNA (393bp) protein (131aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YCR7_9RHIZ
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EHH10389.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.
lactoylglutathione lyase
SCNpilot_solid_1_scaffold_1_105
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107949..108425
DNA (477bp) protein (159aa)
OsmC family protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IYY1_PSEUL
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:BAK75734.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiani
SCNpilot_solid_1_scaffold_1_106
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108437..108826
DNA (390bp) protein (130aa)
Amino acid-binding ACT domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRA7_OPITP
amino acid-binding ACT domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KDR37887.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathe
SCNpilot_solid_1_scaffold_1_107
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108886..109269)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CJY8_AGRT5
hypothetical protein
GATS-like protein 1 {ECO:0000313|EMBL:KJX89269.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacter
SCNpilot_solid_1_scaffold_1_108
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109294..110379)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00037C371A
Diguanylate cyclase {ECO:0000313|EMBL:KEZ76751.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hyd
diguanylate cyclase
SCNpilot_solid_1_scaffold_1_109
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110535..110957)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI00031A4359
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDF84426.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas kna
SCNpilot_solid_1_scaffold_1_110
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111126..112040)
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7D3_ACIDE rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EER59608.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
transcriptional regulator, LysR family rbh
SCNpilot_solid_1_scaffold_1_111
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112326..112958
DNA (633bp) protein (211aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7D4_ACIDE rbh
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:EER59609.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
putative NADP oxidoreductase, coenzyme F420-dependent rbh
SCNpilot_solid_1_scaffold_1_112
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112996..113799
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI000308EEC6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94463.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
SCNpilot_solid_1_scaffold_1_113
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113796..114470
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Xanthomonas arboricola RepID=UPI000305595B
phospholipase/carboxylesterase
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:ABD70254.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferr
SCNpilot_solid_1_scaffold_1_114
unknown

Not on your lists

comp(114419..114565)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_1_115
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114619..115485
DNA (867bp) protein (289aa)
Oxidoreductase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F6P7_9BURK
Oxidoreductase {ECO:0000313|EMBL:EHK66059.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans
oxidoreductase
SCNpilot_solid_1_scaffold_1_116
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115411..116430)
DNA (1020bp) protein (340aa)
Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X303_COMTE rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EED68556.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamona
transcriptional regulator, LysR family
SCNpilot_solid_1_scaffold_1_117
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116465..117898
DNA (1434bp) protein (478aa)
Lipolytic enzyme, G-D-S-L domain protein n=3 Tax=Azotobacter vinelandii RepID=C1DF80_AZOVD rbh
lipolytic enzyme, G-D-S-L domain-containing protein
Lipolytic enzyme, G-D-S-L domain protein {ECO:0000313|EMBL:AGK20383.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="
SCNpilot_solid_1_scaffold_1_118
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117895..119127)
DNA (1233bp) protein (411aa)
Glycosyltransferase (Family 28) n=1 Tax=Achromobacter piechaudii HLE RepID=J4J7X6_9BURK rbh
Glycosyltransferase (Family 28) {ECO:0000313|EMBL:EJO31444.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobac
hypothetical protein rbh
SCNpilot_solid_1_scaffold_1_119
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119155..120543)
DNA (1389bp) protein (463aa)
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:CRE04088.1}; EC=3.6.4.13 {ECO:0000313|EMBL:CRE04088.1};; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
Probable ATP-dependent RNA helicase n=3 Tax=Bordetella bronchiseptica RepID=K4QQB9_BORBO rbh
dbpA; ATP-dependent RNA helicase
SCNpilot_solid_1_scaffold_1_120
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120707..121561)
DNA (855bp) protein (285aa)
AraC family transcriptional regulator (EC:2.1.1.63)
AraC family transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S458_9BURK
AraC family transcriptional regulator {ECO:0000313|EMBL:EHP42697.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
Displaying items 91-120 of 493 in total

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