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SCNpilot_solid_1_scaffold_1_99

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(103361..104038)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbM n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I2C6_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 221.0
  • Bit_score: 341
  • Evalue 5.20e-91
IncP-type conjugative transfer protein TrbM similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 223.0
  • Bit_score: 368
  • Evalue 1.10e-99
IncP-type conjugative transfer protein TrbM {ECO:0000313|EMBL:CDM25179.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 223.0
  • Bit_score: 368
  • Evalue 5.60e-99

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCAAACCCTTCCCGCCTTGCGGGCTGGGGCGCTGGTGCTTGCCTGCGCCCTGGCCCCACTCGCCCATGCGTCCGATACCGCTGATCTACTGACCGGCATTCCCCGTCTAGCCTGCGAAGCAACACTATGCCTGTCGTCCAGTCTCCAGCCCGGTGAATGCAGCCCGTCACTGGAGCACTACTTTGGCATCAAGCGATTCAATCGGCATGGCCTGGACTGGGGTGCTACCGTGGCAGCCCGTCGCAGTTTCCTTGGGCAGTGCCCGGCTGCAACCGACCCCGGCATGCCCGAACGGGTGGAGGCCATCGCGCACGGTGCGGGCAAATGCGACGCGGATTATCTGAACCGGGCCTATGCCTCCATGGCCTACCAGTGGCGCATCCGGGGCTATCGCCAGGTAGCTGACGGCAGCACCCGTGAGCCCGTCTACGAAGTCCACGCACTCGATACCGTAACGCTGACCAAGCTGCCTGCCTGGTGCGTGGCCTACAACAACCACGCCTGGACCTATGAACTGTCCGTGCGCTATGTGGGCGAACCCCGCATGGGCGGGCACTGGGTCAAAGCCAAAGATTTCGAGGCAGCTCAGGCCCGCTGGGATGCACAACATGGCGGCGCCTGGGCGCAAGGCTGGAATTTCACGCTGACCGACCCCAGACGCGGCAGCATGGACTGA
PROTEIN sequence
Length: 226
MQTLPALRAGALVLACALAPLAHASDTADLLTGIPRLACEATLCLSSSLQPGECSPSLEHYFGIKRFNRHGLDWGATVAARRSFLGQCPAATDPGMPERVEAIAHGAGKCDADYLNRAYASMAYQWRIRGYRQVADGSTREPVYEVHALDTVTLTKLPAWCVAYNNHAWTYELSVRYVGEPRMGGHWVKAKDFEAAQARWDAQHGGAWAQGWNFTLTDPRRGSMD*