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SCNpilot_solid_1_scaffold_1_119

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(119155..120543)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DbpA {ECO:0000313|EMBL:CRE04088.1}; EC=3.6.4.13 {ECO:0000313|EMBL:CRE04088.1};; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 462.0
  • Bit_score: 814
  • Evalue 1.00e-232
Probable ATP-dependent RNA helicase n=3 Tax=Bordetella bronchiseptica RepID=K4QQB9_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 462.0
  • Bit_score: 815
  • Evalue 2.50e-233
  • rbh
dbpA; ATP-dependent RNA helicase similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 462.0
  • Bit_score: 814
  • Evalue 2.10e-233

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Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
GTGACTCATACGGCCTTTTCCTCCCTGCCCCTGCTGCCCGCCCTGCAAGACAATCTGCACGGCCTGGGCTTTGCGCGGATGACGCCCATCCAGGCCCGGAGCCTGCCGCTCATCCTGGAAGGCCGCGACCTGATCGCGCAGGCCAAGACCGGCAGCGGCAAGACCGCGGCCTTCGGGCTGGGCGTACTGCAGAATCTGGATGTCGGCCGCCTGGCCCCGCAGGCGCTGGTGATCTGCCCCACCCGTGAACTGGCCGACCAGGTGGCGCAGGAATTGCGCCGGCTGGCCCGCCTGGTCCCCAACGTCAAGGTGCTGACGCTGTGCGGCGGCGTCGCCGCGCGCCCCCAGGCCGAATCGCTGGGTCGCGGCGTCCACGTCGTGGTGGGCACGCCCGGCCGCATCCAGGATCACCTGGCGCGCGGCAGCCTGGACCTGTCCGCCCTGAACACGCTGGTGCTGGACGAAGCGGATCGCATGGTGGACATGGGCTTCCACGACGATATCGTCGCGATCGTCTCGCACTGCCCGACCCGGCGCCAGACGCTGCTCTTTTCGGCCACCTACCCCGACAATATCCGCAAGCTCAGCGCCCGCTTCCTGCGCAACCCCGCCGAGGTCAAGGTCGAGGCCCAGCACGACGCCAGCCGCATCGAGCAGATCTTCTACGAAATCGACGAACGCGAAAGGCTGGACGCCGTAGTCCGCTTGCTGGCCCATTTCCGCCCGGTTTCCACGCTGGCATTCTGCAATACCAAGATCCGCAGCCACGAACTGGTCGAACGACTGCAATCCGAGGGCATCAGGGCCCAGGCGCTCAACGGAGACCTGGAGCAGCGCGAACGCGACGAAATCCTGATCCAGTTCGCCAACCAGAGCTGCGCCGTCCTGGTCGCAACCGACGTGGCCGCCCGCGGCCTGGACATCCAGGACCTGGGCGCCGTGATCAATGTGGACATTACCAAGGACACCGAAGTCCACGTGCACCGCATCGGCCGCAGCGGCCGGGGCGAACAGAAAGGGCTGGCGCTGAGCCTGTGTTCGCCCGACGAAATGCGCTGGGCCGATCTGATCGAGCGATACCAGGGCGCGCCGCTGAAATGGGCCGGCCTGCGTTCGCTGCGCCCGAAGTCCGGCCGCGCCCTGCAGGCGCCCATGACGACTTTATGCATCCAGGGCGGCAAGAAGGACAAGCTGCGCCCCGGCGACCTGCTGGGCGCCCTGACCGGCGACGCAGGCCTGGCGTTCGAGCAGGTCGGCAAGATCCACATCACCGAATTCAGCGCCTACGTGGCGCTGGACCGGCAGATCGCCCAGCAGGCGTTTGCGCGGATCTCCAACTGCACCATCAAGGGCCGCCGCTTCCGCATGCGGTTTCTGGAAGAGTTCTGA
PROTEIN sequence
Length: 463
VTHTAFSSLPLLPALQDNLHGLGFARMTPIQARSLPLILEGRDLIAQAKTGSGKTAAFGLGVLQNLDVGRLAPQALVICPTRELADQVAQELRRLARLVPNVKVLTLCGGVAARPQAESLGRGVHVVVGTPGRIQDHLARGSLDLSALNTLVLDEADRMVDMGFHDDIVAIVSHCPTRRQTLLFSATYPDNIRKLSARFLRNPAEVKVEAQHDASRIEQIFYEIDERERLDAVVRLLAHFRPVSTLAFCNTKIRSHELVERLQSEGIRAQALNGDLEQRERDEILIQFANQSCAVLVATDVAARGLDIQDLGAVINVDITKDTEVHVHRIGRSGRGEQKGLALSLCSPDEMRWADLIERYQGAPLKWAGLRSLRPKSGRALQAPMTTLCIQGGKKDKLRPGDLLGALTGDAGLAFEQVGKIHITEFSAYVALDRQIAQQAFARISNCTIKGRRFRMRFLEEF*