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SCNpilot_solid_1_scaffold_1_109

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(110535..110957)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI00031A4359 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 128.0
  • Bit_score: 197
  • Evalue 7.60e-48
putative membrane protein similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 124.0
  • Bit_score: 192
  • Evalue 6.90e-47
Putative membrane protein {ECO:0000313|EMBL:CDF84426.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas kna similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 124.0
  • Bit_score: 192
  • Evalue 3.40e-46

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Taxonomy

Pseudomonas knackmussii → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGGAACGTTCTCTCAATCCGGCTGTCAGCGGCACAGCTCCCTACGCAGCCTTGCTGCTCCGCCTGGCGCTGGGCATCATGTTCCTGGCCCATGGCTTGACCAAACTGTTCATCTTCACGCCGACGGGAACCGTAAAGTTTTTCGCGAGTGTGGGCTTTCCCGGGTTCCTGGCGTATCCGGTCATCGCTTTCGAGATCATCGGCGGCGTCATGCTGATCCTGGGAATCGTGCCGCGCTGGGTCGCGGGGCTGGCTGCGATTGAGCTCCTGGTGGCCTCATCGGTGCATTGGGCCAATGGATGGGCGTTCGCGGCACCCAATGGCGGAGGCTGGGAATATCCGGTTTTCCTGGCGGTCGCCGCGGCAGCGCTGGCCTTGCTGGGGGACGGCGCATACGCGCTCAAGCGGTCGCTGCGCACGTGA
PROTEIN sequence
Length: 141
MERSLNPAVSGTAPYAALLLRLALGIMFLAHGLTKLFIFTPTGTVKFFASVGFPGFLAYPVIAFEIIGGVMLILGIVPRWVAGLAAIELLVASSVHWANGWAFAAPNGGGWEYPVFLAVAAAALALLGDGAYALKRSLRT*