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SCNpilot_solid_1_scaffold_1_96

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(101887..102291)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB3 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GML7_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 103.0
  • Bit_score: 185
  • Evalue 2.90e-44
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 130.0
  • Bit_score: 245
  • Evalue 8.60e-63
Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) {ECO:0000313|EMBL:CDM25182.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 130.0
  • Bit_score: 245
  • Evalue 4.30e-62

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGGCGACCCCCACCAGTAGCACACGCGCCGCCCGCATCGGCCACACAGACCAGTCGCCCGGCGACCACCAGCCCCCGAACACTTATCCCGTTTTCAAGGGCCTGGGCCGCAAGGCGACCTTCATGGGCATCCCCACCACTTTGCTGCTCGGCGCATTCGCGTGCGTAGCGATCATCGCCATGACAGCCGGACTGATCTGGTGGGGGCTGCTGCTGGTCGTAATGCCCACGCTGGCCATGCTCACACGCGATGACGACAAAGCCATCGACATCCTCTGGCTGGAAATCAAGACCCGTCGCACGAATCGCCAACAGCGATTCTGGCGCGGCTCCAGCTATGCCCCGCAGGGCTACCACCGCAACCGGCCCTGGCGCCGTTTGCTTTCCCGAAGGACTCTGCCATGA
PROTEIN sequence
Length: 135
MATPTSSTRAARIGHTDQSPGDHQPPNTYPVFKGLGRKATFMGIPTTLLLGAFACVAIIAMTAGLIWWGLLLVVMPTLAMLTRDDDKAIDILWLEIKTRRTNRQQRFWRGSSYAPQGYHRNRPWRRLLSRRTLP*