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SCNpilot_solid_1_scaffold_11

Search features with annotation key words

Displaying items 121-150 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_11_118
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126547..127716
DNA (1170bp) protein (390aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2KVX1_9BURK rbh
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17808.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
extracellular ligand-binding receptor
SCNpilot_solid_1_scaffold_11_119
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127778..128833
DNA (1056bp) protein (352aa)
Putative ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X8S1_VARPD rbh
High-affinity branched-chain amino acid transport system permease protein LivH rbh
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CDM25534.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
SCNpilot_solid_1_scaffold_11_120
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128830..130626
DNA (1797bp) protein (599aa)
metal-dependent hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00037775EB rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL77141.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
ABC transporter, ATP-binding protein
SCNpilot_solid_1_scaffold_11_121
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130623..131354
DNA (732bp) protein (244aa)
metal-dependent hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI000361EAE6 rbh
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17805.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
ABC transporter
SCNpilot_solid_1_scaffold_11_122
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131344..132942
DNA (1599bp) protein (533aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CDM25531.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CDM25531.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcali
crotonobetaine/carnitine-CoA ligase n=1 Tax=Variovorax paradoxus RepID=UPI00035EADA4 rbh
SCNpilot_solid_1_scaffold_11_123
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132945..133718
DNA (774bp) protein (258aa)
3-oxoacyl-ACP reductase n=1 Tax=Variovorax paradoxus RepID=UPI00035EFF10
putative 3-oxoacyl-[acyl-carrier-protein] reductase
Putative 3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:AGU48713.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s
SCNpilot_solid_1_scaffold_11_124
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133839..134411
DNA (573bp) protein (191aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax avenae RepID=UPI0002F69F2D
Transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDM25530.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_11_125
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134573..136183
DNA (1611bp) protein (537aa)
Acetyl-coenzyme A synthetase (EC:6.2.1.1) rbh
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:CDM25544.1}; EC=6.2.1.1 {ECO:0000313|EMBL:CDM25544.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
2-aminobenzoate-CoA ligase n=1 Tax=Cupriavidus sp. WS RepID=UPI00037F2558 rbh
SCNpilot_solid_1_scaffold_11_126
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136252..136644
DNA (393bp) protein (131aa)
endoribonuclease L-PSP n=1 Tax=Cupriavidus sp. WS RepID=UPI00037245DE
Putative translation initiation inhibitor, yjgF family
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:CDM25520.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniel
SCNpilot_solid_1_scaffold_11_127
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136722..137360
DNA (639bp) protein (213aa)
Uracil phosphoribosyltransferase (EC:2.4.2.9) rbh
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {
Uracil phosphoribosyltransferase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ93_PUSST rbh
SCNpilot_solid_1_scaffold_11_128
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137479..137802
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ91_PUSST
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDM25516.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_11_129
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137808..138239
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XHW8_9BURK
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDM25515.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella
SCNpilot_solid_1_scaffold_11_130
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138236..138577
DNA (342bp) protein (114aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25514.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_11_131
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138635..140182)
DNA (1548bp) protein (516aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KW96_BORA1 rbh
3-polyprenyl-4-hydroxybenzoate carboxy-lyase rbh
SCNpilot_solid_1_scaffold_11_132
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140263..141195
DNA (933bp) protein (311aa)
Lytic transglycosylase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ87_PUSST
Probable transmembrane protein rbh
Probable transmembrane protein {ECO:0000313|EMBL:CDM25512.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellani
SCNpilot_solid_1_scaffold_11_133
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141230..142429)
DNA (1200bp) protein (400aa)
Aspartate aminotransferase (EC:2.6.1.1) rbh
Aspartate aminotransferase {ECO:0000313|EMBL:CDM25511.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDM25511.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
aminotransferase n=1 Tax=Pusillimonas noertemannii RepID=UPI00030DDD52 rbh
SCNpilot_solid_1_scaffold_11_134
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142487..143413
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ85_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25510.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_11_135
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143504..145798
DNA (2295bp) protein (765aa)
NADP-dependent malic enzyme {ECO:0000313|EMBL:CDM25508.1}; EC=1.1.1.40 {ECO:0000313|EMBL:CDM25508.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
NADP-dependent malic enzyme (EC:1.1.1.40) rbh
Malic enzyme n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ84_PUSST rbh
SCNpilot_solid_1_scaffold_11_136
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145821..146987
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ83_PUSST rbh
Patatin rbh
Patatin {ECO:0000313|EMBL:CDM25507.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.
SCNpilot_solid_1_scaffold_11_137
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146984..147445
DNA (462bp) protein (154aa)
barstar family protein 2 n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E85054
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM25506.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_11_138
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147547..148269)
DNA (723bp) protein (241aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601, ECO:0000313|EMBL:CDM25505.1}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1437824 species="Bacteria; Proteobact
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U4N7_ALCXX
Ribosomal RNA small subunit methyltransferase E
SCNpilot_solid_1_scaffold_11_139
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148377..150452
DNA (2076bp) protein (692aa)
Transketolase {ECO:0000313|EMBL:CDM25504.1}; EC=2.2.1.1 {ECO:0000313|EMBL:CDM25504.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellani
Transketolase (EC:2.2.1.1) rbh
transketolase n=1 Tax=Pusillimonas noertemannii RepID=UPI0003804E66 rbh
SCNpilot_solid_1_scaffold_11_140
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150465..151475
DNA (1011bp) protein (337aa)
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12) rbh
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Pusillimonas noertemannii RepID=UPI0003033D31 rbh
SCNpilot_solid_1_scaffold_11_141
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151636..152823
DNA (1188bp) protein (396aa)
Phosphoglycerate kinase (EC:2.7.2.3) rbh
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1437824 species="Bacteria;
Phosphoglycerate kinase n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XHV5_9BURK rbh
SCNpilot_solid_1_scaffold_11_142
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152972..154969
DNA (1998bp) protein (666aa)
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit Tau {ECO:0000313|EMBL:CAP43896.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CAP43896.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligena
DNA polymerase III subunit Tau n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HZ16_BORPD rbh
SCNpilot_solid_1_scaffold_11_143
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155013..155339
DNA (327bp) protein (109aa)
Nucleoid-associated protein BAV0915 n=1 Tax=Bordetella avium (strain 197N) RepID=Y915_BORA1
hypothetical protein
Nucleoid-associated protein BN940_04381 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sourc
SCNpilot_solid_1_scaffold_11_144
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155341..155949
DNA (609bp) protein (203aa)
Recombination protein RecR n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=RECR_BORPD rbh
Recombination protein RecR rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Caste
SCNpilot_solid_1_scaffold_11_145
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156028..157074
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUI3_PUSST rbh
Hydroxymethylpyrimidine ABC transporter, substrate-binding component rbh
Hydroxymethylpyrimidine ABC transporter, substrate-binding component {ECO:0000313|EMBL:CDM23351.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae
SCNpilot_solid_1_scaffold_11_146
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157067..157909
DNA (843bp) protein (281aa)
ABC transporter ATP-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUI4_PUSST rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:CDM23352.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligen
SCNpilot_solid_1_scaffold_11_147
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157928..158719
DNA (792bp) protein (264aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GUI5_PUSST rbh
Alkanesulfonates transport system permease protein rbh
Alkanesulfonates transport system permease protein {ECO:0000313|EMBL:CDM23353.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;
Displaying items 121-150 of 250 in total

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