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SCNpilot_solid_1_scaffold_11

Search features with annotation key words

Displaying items 91-120 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_11_88
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91974..92327)
DNA (354bp) protein (118aa)
Sulfite dehydrogenase (Cytochrome) subunit SorB n=1 Tax=Advenella kashmirensis W13003 RepID=V8QTJ2_9BURK
Sulfite dehydrogenase (Cytochrome) subunit SorB {ECO:0000313|EMBL:ETF02957.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella
hypothetical protein
SCNpilot_solid_1_scaffold_11_89
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92329..93564)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQA3_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEC20613.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (s
SCNpilot_solid_1_scaffold_11_90
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93643..94404
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036FD8E8
Copper resistance protein C {ECO:0000313|EMBL:ESZ15559.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
SCNpilot_solid_1_scaffold_11_91
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94448..95383)
DNA (936bp) protein (312aa)
Protein-export membrane protein SecF n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQA0_PUSST rbh
Protein-export membrane protein SecF rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464, ECO:0000313|EMBL:CDM25550.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenacea
SCNpilot_solid_1_scaffold_11_92
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95396..97267)
DNA (1872bp) protein (624aa)
preprotein translocase subunit SecD n=1 Tax=Pusillimonas noertemannii RepID=UPI0003061249 rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cast
Protein-export membrane protein SecD rbh
SCNpilot_solid_1_scaffold_11_93
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97332..97676)
DNA (345bp) protein (115aa)
Putative secreted protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ98_PUSST
Preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:CDM25548.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
SCNpilot_solid_1_scaffold_11_94
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97771..98907)
DNA (1137bp) protein (379aa)
tRNA-guanine transglycosylase (EC:2.4.2.29) rbh
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
queuine tRNA-ribosyltransferase n=1 Tax=Pusillimonas noertemannii RepID=UPI00031F69BE rbh
SCNpilot_solid_1_scaffold_11_95
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98904..99962)
DNA (1059bp) protein (353aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UMH1_ALCFA rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase rbh
SCNpilot_solid_1_scaffold_11_96
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100154..101653
DNA (1500bp) protein (500aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4) rbh
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDM25545.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CDM25545.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alc
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ94_PUSST rbh
SCNpilot_solid_1_scaffold_11_97
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

101879..104236
DNA (2358bp) protein (786aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS05_ACIAC rbh
salicylyl-CoA 5-hydroxylase rbh
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ABM33743.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
SCNpilot_solid_1_scaffold_11_98
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104233..104997
DNA (765bp) protein (255aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100) rbh
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ADX45988.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ADX45988.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9S3_ACIAP rbh
SCNpilot_solid_1_scaffold_11_99
Ralstonia syzygii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105053..105907
DNA (855bp) protein (285aa)
Putative enoyl-coa hydratase protein (PaaG) {ECO:0000313|EMBL:CCA87375.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCA87375.1};; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Enoyl-CoA hydratase (EC:4.2.1.17) rbh
Putative enoyl-coa hydratase protein (PaaG) n=1 Tax=Ralstonia syzygii R24 RepID=G3ACS1_9RALS rbh
SCNpilot_solid_1_scaffold_11_100
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105909..107075
DNA (1167bp) protein (389aa)
putative acyl-coa dehydrogenase oxidoreductase protein (abmD) (EC:1.3.8.1)
Putative acyl-coa dehydrogenase oxidoreductase protein (AbmD) {ECO:0000313|EMBL:CCA83724.1}; EC=1.3.99.2 {ECO:0000313|EMBL:CCA83724.1};; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacte
Putative acyl-coa dehydrogenase oxidoreductase protein (AbmD) n=1 Tax=Ralstonia solanacearum RepID=D8MYJ5_RALSL rbh
SCNpilot_solid_1_scaffold_11_101
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107100..107549
DNA (450bp) protein (150aa)
Putative 4-hydroxybenzoyl CoA thioesterase (EC:3.1.2.23)
Putative 4-hydroxybenzoyl CoA thioesterase {ECO:0000313|EMBL:CDM25521.1}; EC=3.1.2.23 {ECO:0000313|EMBL:CDM25521.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=3 Tax=Ralstonia RepID=E2STW7_9RALS
SCNpilot_solid_1_scaffold_11_102
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107599..108672
DNA (1074bp) protein (358aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000370E8DB rbh
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:EJL77162.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
putative NAD(P)-dependent dehydrogenase
SCNpilot_solid_1_scaffold_11_103
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108662..109681
DNA (1020bp) protein (340aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00037F7910 rbh
NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADU35852.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
SCNpilot_solid_1_scaffold_11_104
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109696..110193)
DNA (498bp) protein (166aa)
Transcriptional regulator, MarR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSP2_VARPS
Homoprotocatechuate degradative operon repressor
Homoprotocatechuate degradative operon repressor {ECO:0000313|EMBL:CDM25542.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;"
SCNpilot_solid_1_scaffold_11_105
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110381..112546
DNA (2166bp) protein (722aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8) rbh
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:ACS17317.1}; EC=1.2.7.8 {ECO:0000313|EMBL:ACS17317.1};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
indolepyruvate ferredoxin subunit alpha n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E6822B rbh
SCNpilot_solid_1_scaffold_11_106
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112574..114160
DNA (1587bp) protein (529aa)
indolepyruvate oxidoreductase subunit B (EC:1.2.7.8) rbh
Putative indolepyruvate:ferredoxin oxidoreductase oxidoreductase protein {ECO:0000313|EMBL:CAD15530.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAD15530.1};; TaxID=267608 species="Bacteria; Proteobacteria; Betap
Indolepyruvate oxidoreductase subunit B n=3 Tax=Ralstonia solanacearum RepID=V5ABJ5_RALSL rbh
SCNpilot_solid_1_scaffold_11_107
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114157..115158
DNA (1002bp) protein (334aa)
vanillate O-demethylase n=1 Tax=Variovorax paradoxus RepID=UPI0003621F92 rbh
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ACS18143.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).
SCNpilot_solid_1_scaffold_11_108
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115213..116526
DNA (1314bp) protein (438aa)
Rieske (2Fe-2S) iron-sulfur domain n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4L8_VARPE rbh
rieske (2fe-2S) iron-sulfur domain
Rieske (2Fe-2S) iron-sulfur domain {ECO:0000313|EMBL:ADU35859.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_solid_1_scaffold_11_109
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116538..117026
DNA (489bp) protein (163aa)
Aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLB3_VEREI
aromatic-ring-hydroxylating dioxygenase subunit beta
Aromatic-ring-hydroxylating dioxygenase, beta subunit {ECO:0000313|EMBL:ABM58420.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobac
SCNpilot_solid_1_scaffold_11_110
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117040..118665
DNA (1626bp) protein (542aa)
crotonobetaine/carnitine-CoA ligase n=1 Tax=Variovorax paradoxus RepID=UPI000362C14D rbh
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADU35861.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
SCNpilot_solid_1_scaffold_11_111
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118665..119831
DNA (1167bp) protein (389aa)
Acetyl-CoA acetyltransferase n=1 Tax=Variovorax sp. CF313 RepID=J3CS72_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25539.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_11_112
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119828..121081
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KA82_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJL77150.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
SCNpilot_solid_1_scaffold_11_113
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121106..121915
DNA (810bp) protein (270aa)
Putative metal-dependent hydrolase n=1 Tax=Variovorax sp. CF313 RepID=J3CRP6_9BURK rbh
Putative metal-dependent hydrolase {ECO:0000313|EMBL:EJL77149.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
hypothetical protein
SCNpilot_solid_1_scaffold_11_114
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121912..122649
DNA (738bp) protein (246aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4M4_VARPE rbh
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADU35865.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
SCNpilot_solid_1_scaffold_11_115
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122817..123983
DNA (1167bp) protein (389aa)
Extracellular ligand-binding receptor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4M5_VARPE rbh
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU35866.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.
SCNpilot_solid_1_scaffold_11_116
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123996..125141
DNA (1146bp) protein (382aa)
Extracellular ligand-binding receptor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSQ4_VARPS rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CDM25535.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac
SCNpilot_solid_1_scaffold_11_117
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125174..126487
DNA (1314bp) protein (438aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSQ5_VARPS rbh
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ACS18153.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para
Displaying items 91-120 of 250 in total

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