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SCNpilot_solid_1_scaffold_11_115

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 122817..123983

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4M5_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 389.0
  • Bit_score: 596
  • Evalue 1.60e-167
  • rbh
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 389.0
  • Bit_score: 596
  • Evalue 4.40e-168
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU35866.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax. similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 389.0
  • Bit_score: 596
  • Evalue 2.20e-167

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGACATCGTTTCGTTCATTGCGCACCCTGACCGCGGCAGCCGCTGCGGTCGGTGCGATGGCCATGGCGCCCGGCGCCCACGCAGCCGACTACAAGGTCGGATTCATCACGTCCCTGTCGGGGCCCGTGTCCTCGCTCGGGATTCCCTACGACAAAGGCATCAAGGCCGCGTATGAGTTTCAGTCCAAGGTCGATGGCCGCAAGGTCGAGCTGATCAAGCTGGACGACGGCTCCAATCCCAGCACGGCCGCGCGCAATGCGCGCAAGCTCATCAACGAAGACAAGGTCGACGCCATCATCGGCACGGCCGGCTCGCCCGGGGCGCTCGCCATCGCCGCCGTGGCCCGGGAAAACAAGGTTCCCCTGATTTCCATCGCCAATGCCAATCTTCCGGGCGAAGAGGGCGCGTGGATGGTCACGGTGCCGCAGCCGGCGCCCCTGATGGTCGGCGCGGTGGTCGACCGCATGAAGGCTTCGGGCGTCAAGACCGTCGGCTACATCGGCTTCTCCGATGCCTGGGGCGACCTGGTCTACGACGCACTGACCAAGCGCGCCAAGGAAGACGGCATCGAAGTCGTCACCAACGAACGGTACGCGCGGGCGGACTCGTCCGTGGCGGGCCAGGTGCTGAAGATCGTGGCCAAGCGTCCGGATGCCGTGATCACGGGTACGTCCGGGACGCCCGGGGCGCTGCCTTACCTGGAACTGGCGCAGCGGGGCTACAAGGGCCAGATCTATGGCACCCACGCCCTCATCAACCCGGATTTCGTGCGGGTGGGCGGCAGTGCCGTGAACGGCCTGCTCGCGCCGACCGGCCCCGTCATCGTGGCCGATCAACTGCCTGAAAATAATCCGATCCGCAAGGTGGCCCTGGAATTCCACAAGGCCTATCAGCAGGCCAACGGGGAACCGGCCGTGGATGCCTTTTCCGCCTATTCCTTCGATGCCTGGCTGATTTTCCTGGATGCGGCCAAGCGCGCAACCGCCAAAGCCCAGCCGGGGACTCCCGAGTTCCGCGTGGCCCTGCGCGACGCCATCACCAGCACCAAGGAACTGGTGGGCACCCATGGCGTGTACAACTTCAAGCCGGACAGCCGCTATGGTTCCGACGAGCGCTCGCGGGTCATCGTGAAGCTCGAAAACGGCAAGTGGGTCCTGCAACCCTGA
PROTEIN sequence
Length: 389
MTSFRSLRTLTAAAAAVGAMAMAPGAHAADYKVGFITSLSGPVSSLGIPYDKGIKAAYEFQSKVDGRKVELIKLDDGSNPSTAARNARKLINEDKVDAIIGTAGSPGALAIAAVARENKVPLISIANANLPGEEGAWMVTVPQPAPLMVGAVVDRMKASGVKTVGYIGFSDAWGDLVYDALTKRAKEDGIEVVTNERYARADSSVAGQVLKIVAKRPDAVITGTSGTPGALPYLELAQRGYKGQIYGTHALINPDFVRVGGSAVNGLLAPTGPVIVADQLPENNPIRKVALEFHKAYQQANGEPAVDAFSAYSFDAWLIFLDAAKRATAKAQPGTPEFRVALRDAITSTKELVGTHGVYNFKPDSRYGSDERSRVIVKLENGKWVLQP*