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SCNpilot_solid_1_scaffold_11_116

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 123996..125141

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSQ4_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 379.0
  • Bit_score: 551
  • Evalue 5.60e-154
  • rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 380.0
  • Bit_score: 580
  • Evalue 3.20e-163
  • rbh
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CDM25535.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenac similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 380.0
  • Bit_score: 580
  • Evalue 1.60e-162

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGCTTGCGCGCATCCTTCCCACGGCAGTCCTGGCGGCTGCAACCGCATTGTCCTATCCGGCGATGGGGGCGAACCTCAAGGTCGGCGTCATCAGTTCGCTCTCCGGCCCCGTTTCCGCGCTGGGGGTGCCTTACGAAAAGGGCATTCGCGCGGCGCACGCCGAACATCCCGTGATTGCGGGCCATCAAGTGGATCTGATCGTGCTGGATGACGCCTCCGATCCGACGACGGCGGCGCGCAATGCGCGCAAGCTGGCGGCCGAGGACAAGGTGGACGTGCTGATCGGCACTTCCGGCGTGCCGGGCGCCATGGCGATCGCGGGCGTCGCCCGCGACCTGAAGGTGCCCCTGATCTCGCCGACCCCGCTTTCCCTGCCGGGCAAGGAAAACGACTGGACGGTGTCGGTGTCGCAGCCGTTTTGCCTGATGGTGTCGGCGGTGGTCGACCGCATGAAGGTCTCGGGCGTGAAAACCGTGGCCTTCATCGGTTTCTCGGACGCCCTGGGCGACATCGCCTACGACTGCCTGGTCCAGAGCGCCCGGGACAAGGGCATCGAGGTCGTGGCCAATGAACGCTATGCGCGCGGCGACATGTCCGTCGCCGGCCAGATCCTCAAGATCGTCGCCAAGCGTCCCGACGCGGTGTTCGCCGGGAATTCCGGCACGCCGGGCGCCTTGCCCTACCTGGAACTGGCGAAGCGCAATTACCAGGGCCGCATTTATGGCACGCACGGCCTGATCAACGCCGATTTCGTGCGCGTGGCCGGCAGCGCCATCGAAGGCCTGGAGGTCCCCAGCGGCCCGGTGCTGGTTGCCGAACAGCTGCCCAAGGACAATCCCATCCGCGCCGTTTCCATGGATTTTCGCGCAGCCTATGAAAAGACCAATGGCTCGGCGCCCGTGGATGCGTTCTCCGCCTACACCTACGACGCCTACCTGGTCCTGGCCGACGCCGCCAAGCGGGCGACCGGCGAGCCCGGGACCGAAGCCTACCGGCAGTCCCTGAAAGAAGCCATCCTGTCCACGCACGACGTGGTCGGCACGCATGGCATCTACAACTTCTCGTCCAACAGCCGCTATGGGTCGGACCAGCGCGCCGTGGTGGTGGTGCGCATGGAAAAAGGCCACTGGAAGCTGGCTCAGTGA
PROTEIN sequence
Length: 382
MLARILPTAVLAAATALSYPAMGANLKVGVISSLSGPVSALGVPYEKGIRAAHAEHPVIAGHQVDLIVLDDASDPTTAARNARKLAAEDKVDVLIGTSGVPGAMAIAGVARDLKVPLISPTPLSLPGKENDWTVSVSQPFCLMVSAVVDRMKVSGVKTVAFIGFSDALGDIAYDCLVQSARDKGIEVVANERYARGDMSVAGQILKIVAKRPDAVFAGNSGTPGALPYLELAKRNYQGRIYGTHGLINADFVRVAGSAIEGLEVPSGPVLVAEQLPKDNPIRAVSMDFRAAYEKTNGSAPVDAFSAYTYDAYLVLADAAKRATGEPGTEAYRQSLKEAILSTHDVVGTHGIYNFSSNSRYGSDQRAVVVVRMEKGHWKLAQ*