ggKbase home page

SCNpilot_solid_1_scaffold_73

Search features with annotation key words

Displaying items 31-60 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_73_30
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34790..35167)
DNA (378bp) protein (126aa)
Conjugal transfer TrbC transmembrane protein n=2 Tax=Pseudomonas RepID=I7J238_PSEPS
trbC; conjugal transfer TrbC transmembrane protein
Conjugal transfer TrbC transmembrane protein {ECO:0000313|EMBL:CDR92710.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomona
SCNpilot_solid_1_scaffold_73_31
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35164..36192)
DNA (1029bp) protein (343aa)
p-type conjugative transfer atpase trbb n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EML9_9BURK
conjugal transfer protein TrbB
Conjugal transfer protein TrbB {ECO:0000313|EMBL:AIJ47392.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testo
SCNpilot_solid_1_scaffold_73_32
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36189..36653)
DNA (465bp) protein (155aa)
CopG family transcripitonal regulator n=1 Tax=Pseudomonas aeruginosa RepID=UPI00030A41B2
Uncharacterized protein {ECO:0000313|EMBL:AKC05771.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
CopG family transcripitonal regulator
SCNpilot_solid_1_scaffold_73_33
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36650..38650)
DNA (2001bp) protein (667aa)
TRAG family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV36_ALIDB
TRAG family protein {ECO:0000313|EMBL:ADV00568.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitri
trag family protein
SCNpilot_solid_1_scaffold_73_34
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39197..39970)
DNA (774bp) protein (258aa)
Transcriptional regulator, LysR family n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZMS6_THASP
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:KDE91897.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomo
LysR family transcriptional regulator
SCNpilot_solid_1_scaffold_73_35
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40157..41551)
DNA (1395bp) protein (465aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Con
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003700245
integral membrane sensor signal transduction histidine kinase
SCNpilot_solid_1_scaffold_73_36
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41548..42210)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000365FD94
Transcriptional regulatory protein {ECO:0000313|EMBL:CDH44315.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candida
DNA-binding response regulator in two-component regulatory system
SCNpilot_solid_1_scaffold_73_37
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42482..43486
DNA (1005bp) protein (335aa)
CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase (EC:2.4.1.83)
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CAL61765.1}; EC=2.4.1.- {ECO:0000313|EMBL:CAL61765.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacte
Glycosyl transferase, family 2 n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5H8_HERAR
SCNpilot_solid_1_scaffold_73_38
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44028..44759
DNA (732bp) protein (244aa)
UPI0003CF0910 related cluster n=1 Tax=unknown RepID=UPI0003CF0910 rbh
Membrane protein {ECO:0000313|EMBL:ESX77920.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC41
membrane protein
SCNpilot_solid_1_scaffold_73_39
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44770..45462
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F7Q4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESW67109.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
SCNpilot_solid_1_scaffold_73_40
Pseudomonas sp. Tik3, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45614..46978)
DNA (1365bp) protein (455aa)
TnOtChr-like ChrA chromate transporter n=1 Tax=Pseudomonas sp. Tik3 RepID=D6CID7_9PSED rbh
TnOtChr-like ChrA chromate transporter {ECO:0000313|EMBL:CBL87892.1}; TaxID=761262 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
chromate transporter rbh
SCNpilot_solid_1_scaffold_73_41
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46975..48057)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8HZD4_PSEAI rbh
Chromate resistance protein {ECO:0000313|EMBL:KJU79171.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
chromate resistance protein
SCNpilot_solid_1_scaffold_73_42
R_Pseudomonadales_64_12, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48068..50071)
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7KB54_PSEPS
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Pseudomonadales_64_12_curated
hypothetical protein
SCNpilot_solid_1_scaffold_73_43
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50556..51143)
DNA (588bp) protein (196aa)
Conjugal transfer protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HV43_PSEUO rbh
peptidase
Peptidase {ECO:0000313|EMBL:AKA21933.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
SCNpilot_solid_1_scaffold_73_44
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51140..51685)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WWX5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37362.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_solid_1_scaffold_73_45
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51682..51951)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=C6KVG2_9BACT
parB partition protein
Regulator of plasmid copy number {ECO:0000313|EMBL:ABF08141.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia
SCNpilot_solid_1_scaffold_73_46
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51948..52586)
DNA (639bp) protein (213aa)
Plasmid partitioning protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDS6_PSEAI
ParA
ParA {ECO:0000313|EMBL:AIJ46157.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
SCNpilot_solid_1_scaffold_73_47

Not on your lists

comp(52900..53673)
DNA (774bp) protein (258aa)
Conserved hypothetical replication initiator/transcription repressor protein n=1 Tax=uncultured bacterium RepID=C6KVG4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN01014.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_solid_1_scaffold_73_48
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53787..54071)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Shewanella sp. (strain ANA-3) RepID=A0KUM7_SHESA
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:AKA21927.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlo
SCNpilot_solid_1_scaffold_73_49
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54346..55656)
DNA (1311bp) protein (437aa)
NrbE-like protein n=8 Tax=Pseudomonas aeruginosa RepID=S0IHC5_PSEAI
nrbE-like protein
Major facilitator transporter {ECO:0000313|EMBL:AKE69563.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer
SCNpilot_solid_1_scaffold_73_50
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56003..56776)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H632_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM67146.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
hypothetical protein
SCNpilot_solid_1_scaffold_73_51
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57136..57486)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9P2_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84542.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
SCNpilot_solid_1_scaffold_73_52
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57750..58040
DNA (291bp) protein (97aa)
transcriptional regulator n=2 Tax=Burkholderiales RepID=UPI0003728F2E
Transcriptional regulator {ECO:0000313|EMBL:KGE06269.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glad
putative transcriptional regulator
SCNpilot_solid_1_scaffold_73_53
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58116..58430)
DNA (315bp) protein (105aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=Q84EQ9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EPD42145.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
SCNpilot_solid_1_scaffold_73_54
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59067..59594)
DNA (528bp) protein (176aa)
DNA repair protein radC-like protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMP0_PUSST
DNA repair protein radC-like protein
DNA repair protein radC-like protein {ECO:0000313|EMBL:AEC20334.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusill
SCNpilot_solid_1_scaffold_73_55
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60151..61137)
DNA (987bp) protein (329aa)
Cation diffusion facilitator family transporter n=3 Tax=Bacteria RepID=A9BR52_DELAS
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:GAO21774.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" s
hypothetical protein
SCNpilot_solid_1_scaffold_73_56
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61178..61450)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WJ83_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX33111.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
SCNpilot_solid_1_scaffold_73_57
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61660..63690)
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N993_PSEAI
parb domain-containing protein nuclease
ParB domain protein nuclease {ECO:0000313|EMBL:ADU98031.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
SCNpilot_solid_1_scaffold_73_58

Not on your lists

comp(63774..64598)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8NA97_PSEAI rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM15671.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_solid_1_scaffold_73_59
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

65224..66123
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QKY1_CHLP8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF10769.1}; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (strain NCIB 8327
Displaying items 31-60 of 108 in total

View Taxonomy