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SCNpilot_solid_1_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_73_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..3943
DNA (3942bp) protein (1314aa)
Putative outer membrane adhesin like proteiin n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MHN6_PSEPS rbh
Putative outer membrane adhesin like proteiin {ECO:0000313|EMBL:ELS25538.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseud
hemolysin
SCNpilot_solid_1_scaffold_73_2
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3997..4419
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I3Z2_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44231.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (str
SCNpilot_solid_1_scaffold_73_3
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4423..4914
DNA (492bp) protein (164aa)
UPF0178 protein Bpet3884 n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=Y3884_BORPD
hypothetical protein
UPF0178 protein Bpet3884 {ECO:0000255|HAMAP-Rule:MF_00489}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii
SCNpilot_solid_1_scaffold_73_4
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5055..5543
DNA (489bp) protein (163aa)
Putative transcriptional Regulator, MarR family n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AHX3_CUPTR
MarR family transcriptional regulator
Putative transcriptional Regulator, MarR family {ECO:0000313|EMBL:CAP63372.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" sou
SCNpilot_solid_1_scaffold_73_5
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5540..7117
DNA (1578bp) protein (526aa)
major facilitator transporter n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036320BA rbh
Major facilitator transporter {ECO:0000313|EMBL:EYS96852.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus s
multidrug resistance protein rbh
SCNpilot_solid_1_scaffold_73_6
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7086..7421)
DNA (336bp) protein (112aa)
Restriction endonuclease S subunits n=1 Tax=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) RepID=Q5GX62_XANOR
Restriction endonuclease S subunits {ECO:0000313|EMBL:AAW76709.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xantho
hypothetical protein
SCNpilot_solid_1_scaffold_73_7
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7418..7831)
DNA (414bp) protein (138aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y2F7_LEPCP
nucleotidyltransferase substrate-binding protein
Nucleotidyltransferase substrate binding protein, HI0074 family {ECO:0000313|EMBL:ACB35610.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source
SCNpilot_solid_1_scaffold_73_8
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7910..8962)
DNA (1053bp) protein (351aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VIC0_9BURK rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJM99729.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspiri
transcriptional regulator, LacI family
SCNpilot_solid_1_scaffold_73_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9074..10087
DNA (1014bp) protein (338aa)
ABC transporter substrate-binding protein n=1 Tax=Amorphus coralli RepID=UPI00037D58DE rbh
TRAP transporter substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
periplasmic substrate-binding protein
SCNpilot_solid_1_scaffold_73_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10169..10711
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003613792
TRAP transporter small transmembrane protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
TRAP transporter small transmembrane protein
SCNpilot_solid_1_scaffold_73_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10708..11988
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00035F7194 rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein rbh
SCNpilot_solid_1_scaffold_73_12
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12070..12609
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12HJ2_POLSJ rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE42000.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (stra
SCNpilot_solid_1_scaffold_73_13
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12617..13882
DNA (1266bp) protein (422aa)
Ribulose-bisphosphate carboxylase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F2F2_9BURK rbh
ribulose-1,5-bisphosphate carboxylase, Type III
Ribulose-1,5-bisphosphate carboxylase, Type III {ECO:0000313|EMBL:CDM25679.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" s
SCNpilot_solid_1_scaffold_73_14
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13872..15242
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LZY6_9BURK rbh
Hrp-dependent type III effector protein
Uncharacterized protein {ECO:0000313|EMBL:EJL90983.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="P
SCNpilot_solid_1_scaffold_73_15
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15344..16270
DNA (927bp) protein (309aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CDM23970.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CDM23970.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alca
2-hydroxyacid dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GNG0_PUSST rbh
SCNpilot_solid_1_scaffold_73_16
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16270..17001
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000360B94E
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AEC19489.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (stra
SCNpilot_solid_1_scaffold_73_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16979..18079)
DNA (1101bp) protein (367aa)
ADP-ribosylation/Crystallin J1 n=1 Tax=Geobacter sp. (strain M18) RepID=E8WNN4_GEOS8
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23971.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_73_18
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18234..20204
DNA (1971bp) protein (657aa)
Acetoacetyl-CoA synthetase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HTG9_9GAMM rbh
acetoacetyl-CoA synthetase rbh
Acetoacetyl-coenzyme A synthetase {ECO:0000313|EMBL:AFT70261.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcani
SCNpilot_solid_1_scaffold_73_19
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20338..21276
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWT5_9GAMM
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23969.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_73_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21453..23027)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI00036C5D26
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM23978.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_73_trna_1
unknown

Not on your lists

23159..23232
DNA (74bp)
transferRNA
SCNpilot_solid_1_scaffold_73_21
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23971..26652
DNA (2682bp) protein (894aa)
PHP-like n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120Y7_POLSJ rbh
PHP-like {ECO:0000313|EMBL:ABE46905.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC
PHP-like rbh
SCNpilot_solid_1_scaffold_73_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26781..26996)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa JJ692 RepID=U9PQD7_PSEAI
conjugal transfer protein
Uncharacterized protein {ECO:0000313|EMBL:AKE68147.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
SCNpilot_solid_1_scaffold_73_23
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26993..28327)
DNA (1335bp) protein (445aa)
Conjugation TrbI family protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WX59_PSEDE
Type IV secretion system protein virB10 {ECO:0000313|EMBL:EXI90165.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibact
conjugation TrbI family protein
SCNpilot_solid_1_scaffold_73_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28329..29321)
DNA (993bp) protein (331aa)
UPI0003D6C5D7 related cluster n=1 Tax=unknown RepID=UPI0003D6C5D7
trbG; Conjugative transfer protein TrbG
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EPD37335.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
SCNpilot_solid_1_scaffold_73_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29318..30022)
DNA (705bp) protein (235aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=C1MFC5_9ENTR
conjugal transfer protein TrbF
Conjugal transfer protein TrbF {ECO:0000313|EMBL:ETU95305.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
SCNpilot_solid_1_scaffold_73_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30034..31284)
DNA (1251bp) protein (417aa)
P-type conjugative transfer protein TrbL n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8MBI7_PSEAI
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ERV78260.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="
conjugal transfer protein TrbL
SCNpilot_solid_1_scaffold_73_27
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31301..32041)
DNA (741bp) protein (247aa)
P-type conjugative transfer protein TrbJ n=3 Tax=Azotobacter vinelandii RepID=C1DR57_AZOVD rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KEX93363.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas pu
trbJ; conjugal transfer protein TrbJ
SCNpilot_solid_1_scaffold_73_28
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32038..34497)
DNA (2460bp) protein (820aa)
Conjugal transfer protein TrbE n=1 Tax=Thauera terpenica 58Eu RepID=S9ZJV1_9RHOO
Conjugal transfer protein TrbE {ECO:0000313|EMBL:EPZ14906.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 5
type IV transport system protein VirB
SCNpilot_solid_1_scaffold_73_29
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34509..34793)
DNA (285bp) protein (95aa)
Conjugal transfer transmembrane protein TrbD n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GX43_CUPNN
trbD; conjugal transfer transmembrane protein TrbD
Conjugal transfer transmembrane protein TrbD {ECO:0000313|EMBL:AEI81913.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" sourc
Displaying items 1-30 of 108 in total

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