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SCNpilot_solid_1_scaffold_509

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_509_1
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32..880)
DNA (849bp) protein (283aa)
IS2 insertion element transposase InsAB' CP4-44 prophage n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NLZ5_RALSL rbh
insD; IS2 insertion element transposase InsAB'; CP4-44 prophage rbh
IS2 insertion element transposase InsAB' CP4-44 prophage {ECO:0000313|EMBL:CBJ43738.1}; Transposase {ECO:0000313|EMBL:CBJ53407.1}; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; B
SCNpilot_solid_1_scaffold_509_2
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(877..1266)
DNA (390bp) protein (130aa)
Transposase (ORFA protein ) n=2 Tax=Ralstonia solanacearum RepID=D8NT46_RALSL
insC; transposase (ORFA protein )
Transposase (ORFA protein ) {ECO:0000313|EMBL:CBJ50996.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacear
SCNpilot_solid_1_scaffold_509_3
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1488..2666)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LS09_BURGS rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
SCNpilot_solid_1_scaffold_509_4
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2666..4582)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LS10_BURGS rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
SCNpilot_solid_1_scaffold_509_5
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4583..5689)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LS11_BURGS rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
SCNpilot_solid_1_scaffold_509_6
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5695..7668)
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LS12_BURGS rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
SCNpilot_solid_1_scaffold_509_7
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7665..8267)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LS13_BURGS rbh
hypothetical protein; K09935 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
hypothetical protein
SCNpilot_solid_1_scaffold_509_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9492..10529)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037A55FE rbh
DNA primase, phage-associated
DNA primase, phage-associated {ECO:0000313|EMBL:CDM23870.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellanie
SCNpilot_solid_1_scaffold_509_9
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11303..12493
DNA (1191bp) protein (397aa)
Transposase n=2 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GN43_PUSST rbh
transposase rbh
Transposase {ECO:0000313|EMBL:AEC19138.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).
SCNpilot_solid_1_scaffold_509_trna_2
unknown

Not on your lists

comp(12645..12716)
DNA (72bp)
transferRNA
SCNpilot_solid_1_scaffold_509_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12888..13442)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Gordonia terrae NBRC 100016 RepID=H5UCC3_9ACTO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
hypothetical protein
SCNpilot_solid_1_scaffold_509_11
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13466..14884)
DNA (1419bp) protein (473aa)
fumarate reductase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627593 rbh
succinate dehydrogenase rbh
Putative oxidoreductase {ECO:0000313|EMBL:GAF44835.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.
SCNpilot_solid_1_scaffold_509_12
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14881..15669)
DNA (789bp) protein (263aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AIY18485.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AIY18485.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidacea
oxidoreductase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF3B1
oxidoreductase
SCNpilot_solid_1_scaffold_509_13
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15662..16468)
DNA (807bp) protein (269aa)
oxidoreductase n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036F2B72
short-chain dehydrogenase
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:EFL09266.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
SCNpilot_solid_1_scaffold_509_14
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16544..16957)
DNA (414bp) protein (138aa)
nuclear transport factor 2 n=1 Tax=Nocardiopsis synnemataformans RepID=UPI000344FA15
aromatic-ring-hydroxylating dioxygenase subunit beta
Aromatic-ring-hydroxylating dioxygenase beta subunit {ECO:0000313|EMBL:ADH70046.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocard
SCNpilot_solid_1_scaffold_509_15
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17016..18134)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003040AB6 rbh
TRAP dicarboxylate transporter-DctP subunit {ECO:0000313|EMBL:EHA16478.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="
TRAP dicarboxylate transporter-DctP subunit
SCNpilot_solid_1_scaffold_509_16
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18197..19498)
DNA (1302bp) protein (434aa)
C4-dicarboxylate ABC transporter n=1 Tax=Wenxinia marina RepID=UPI000382E3D6 rbh
Wenxma_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70283.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenx
TRAP dicarboxylate transporter subunit DctM rbh
SCNpilot_solid_1_scaffold_509_17
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19509..20042)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000316E94A
Wenxma_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70284.1}; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenx
TRAP dicarboxylate family transporter subunit DctQ
SCNpilot_solid_1_scaffold_509_18
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20298..20996
DNA (699bp) protein (233aa)
GntR family regulatory protein 8 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SY51_ALCXX rbh
Transcriptional regulator for ferulate or vanillate catabolism rbh
GntR family regulatory protein 8 {ECO:0000313|EMBL:EGP46933.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromoba
SCNpilot_solid_1_scaffold_509_19
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21053..21790)
DNA (738bp) protein (246aa)
DNA polymerase III epsilon subunit (EC:2.7.7.7) rbh
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:CDM25942.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDM25942.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcal
DNA polymerase III subunit epsilon n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSJ8_PUSST rbh
SCNpilot_solid_1_scaffold_509_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21868..22320)
DNA (453bp) protein (151aa)
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSJ5_PUSST
SCNpilot_solid_1_scaffold_509_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22352..23101)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSJ4_PUSST rbh
SAM-dependent methyltransferase rbh
SAM-dependent methyltransferase {ECO:0000313|EMBL:CDM25944.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellan
SCNpilot_solid_1_scaffold_509_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23135..23944
DNA (810bp) protein (270aa)
Hydroxyacylglutathione hydrolase (EC:3.1.2.6) rbh
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000313|EMBL:CDM25945.1}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000313|EMBL:CDM25945.1};; Glyoxalase II {ECO:0000256|
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003188B35 rbh
SCNpilot_solid_1_scaffold_509_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23952..25337
DNA (1386bp) protein (462aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSJ2_PUSST rbh
Membrane-bound lytic murein transglycosylase D precursor rbh
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:CDM25946.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" so
SCNpilot_solid_1_scaffold_509_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25364..26146
DNA (783bp) protein (261aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] (EC:1.3.1.9) rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094, ECO:0000313|EMBL:CDM25947.1}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094, ECO:0000313|EMBL:CDM25947.1};; TaxID=1437824 spec
enoyl-ACP reductase n=1 Tax=Pusillimonas noertemannii RepID=UPI000315AD68 rbh
SCNpilot_solid_1_scaffold_509_25
unknown

Not on your lists

26186..26665
DNA (480bp) protein (160aa)

This feature has no annotations

SCNpilot_solid_1_scaffold_509_trna_1
unknown

Not on your lists

comp(26803..26890)
DNA (88bp)
transferRNA
SCNpilot_solid_1_scaffold_509_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26991..27650)
DNA (660bp) protein (220aa)
Riboflavin synthase, eubacterial/eukaryotic (EC:2.5.1.9) rbh
Riboflavin synthase, eubacterial/eukaryotic {ECO:0000313|EMBL:CDM25951.1}; EC=2.5.1.9 {ECO:0000313|EMBL:CDM25951.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
riboflavin synthase subunit alpha n=1 Tax=Pusillimonas noertemannii RepID=UPI0003135648
SCNpilot_solid_1_scaffold_509_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27703..28875)
DNA (1173bp) protein (391aa)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26) rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I298_BORPD rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_509_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28862..29329)
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSG1_PUSST
Ribonucleotide reductase transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; C
Displaying items 1-30 of 40 in total

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