ggKbase home page

SCNpilot_solid_1_scaffold_4655

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_1_scaffold_4655_1
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..183
DNA (183bp) protein (61aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=A9IFT5_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23767.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4655_2
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

395..1132
DNA (738bp) protein (246aa)
ABC transporter substrate-binding protein n=3 Tax=Pseudomonas aeruginosa RepID=U5ALZ1_PSEAI rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23766.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4655_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1227..1505
DNA (279bp) protein (93aa)
Uridylate kinase n=4 Tax=Pseudomonas aeruginosa RepID=U5AN12_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23765.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4655_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1540..2001)
DNA (462bp) protein (154aa)
thioesterase superfamily
Thioesterase superfamily {ECO:0000313|EMBL:CDM23764.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella d
thioesterase superfamily protein id=12551695 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
SCNpilot_solid_1_scaffold_4655_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2031..2702)
DNA (672bp) protein (224aa)
UPI0003CF3A6D related cluster n=1 Tax=unknown RepID=UPI0003CF3A6D rbh
Transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDM23763.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Ca
SCNpilot_solid_1_scaffold_4655_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2807..3160
DNA (354bp) protein (118aa)
Putative ACR protein
Putative ACR protein {ECO:0000313|EMBL:CDM23762.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defra
DsrE family protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur id=12551698 bin=BDI species=Stenotrophomonas maltophilia genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
SCNpilot_solid_1_scaffold_4655_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3160..4290
DNA (1131bp) protein (377aa)
Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000313|EMBL:CDM23761.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CDM23761.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Cas
iscS-2; cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7] id=12551699 bin=BDI species=Dyella japonica genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
SCNpilot_solid_1_scaffold_4655_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4316..5512
DNA (1197bp) protein (399aa)
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDM23760.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Caste
MFS permease id=12551700 bin=BDI species=Stenotrophomonas sp. SKA14 genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
SCNpilot_solid_1_scaffold_4655_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5509..6039
DNA (531bp) protein (177aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=uncultured bacterium RepID=K2G2Z7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23759.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
SCNpilot_solid_1_scaffold_4655_10
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6065..6685
DNA (621bp) protein (207aa)
SAM-dependent methyltransferases rbh
SAM-dependent methyltransferases {ECO:0000313|EMBL:CDM23758.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
hypothetical protein id=12550228 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
SCNpilot_solid_1_scaffold_4655_11
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6958..7395
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF77 RepID=U8BIM2_PSEAI
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23757.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
Displaying 11 items

View Taxonomy