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SCNpilot_solid_1_scaffold_4_101

Organism: SCNPILOT_SOLID_1_Castellaniella_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 116740..117348

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQI5_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 196.0
  • Bit_score: 212
  • Evalue 3.30e-52
LptA, protein essential for LPS transport across the periplasm similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 308
  • Evalue 1.20e-81
  • rbh
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 308
  • Evalue 6.20e-81

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAAAACCTTGCCTCCAGCCCTGCTTGCCGCGTCGGCAGCCTGTTGCCTGGCCCTGTCCGTCCAGGCGGCGTCCGCCCAGAACAAGGCGGCGGACTCCAAAGCGGCGGAACCCGACACCGTCATCCTATCCGACACGCTGCATTACGACGACGTCAGCAAGACCAGCACCTTCACCGGCAACGTGGTCCTGACCCGGGGCGCCATGACCCTGCGGGCTGACAAGCTCGTCACCCACGAAGACGCGCAGGGCAACCAGTTCGGCACCGCCACGGCGGACAAGAGCGGCATCGTCACCATCCGCCAGGAAAACCCGGAAAAATTCGAAACCCTCATCGCCACCGGCCAGCAGGCGGACTACGTCGGGCAGGCCGGCGACATCACCCTGACCGGCCAGGCCACCGTGACGCGCCAGATCTGCGGCCAGATGTTCGACAACGTCCGCGGCGCCAAGATCATCTACCACGACAAGACCGGCACCTACGAAGCCTTCGGCGGCAAGAACTCCGCCGCGGCGGGCGGACGCGTCCGTTCGCTGGCCCAGCCGCAATCCCGCATCGACCAGGCCATCGCCAAGTGCCGCGCCGGGCGCTCCGCCGGGCGCTCGTAA
PROTEIN sequence
Length: 203
MKTLPPALLAASAACCLALSVQAASAQNKAADSKAAEPDTVILSDTLHYDDVSKTSTFTGNVVLTRGAMTLRADKLVTHEDAQGNQFGTATADKSGIVTIRQENPEKFETLIATGQQADYVGQAGDITLTGQATVTRQICGQMFDNVRGAKIIYHDKTGTYEAFGGKNSAAAGGRVRSLAQPQSRIDQAIAKCRAGRSAGRS*